Mercurial > repos > ebi-gxa > seurat_find_clusters
comparison seurat_find_clusters.xml @ 4:8ed848ef86fd draft
"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/ commit a1ad1ddd9b8e4db5bb82c3accae8311e0e488b19"
| author | ebi-gxa |
|---|---|
| date | Fri, 27 Nov 2020 13:47:46 +0000 |
| parents | 0715bcb14547 |
| children | eefaffdcd441 |
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| 3:11a008daee84 | 4:8ed848ef86fd |
|---|---|
| 76 </outputs> | 76 </outputs> |
| 77 | 77 |
| 78 <tests> | 78 <tests> |
| 79 <!-- Ensure count matrix input works --> | 79 <!-- Ensure count matrix input works --> |
| 80 <test> | 80 <test> |
| 81 <param name="input" ftype="rdata" value="out_runpca.rds"/> | 81 <param name="rds_seurat_file" ftype="rdata" value="neighbours_seurat.rds"/> |
| 82 <output name="rds_seurat_file" ftype="rdata" value="out_findclust.rds" compare="sim_size"/> | 82 <output name="rds_seurat_file" ftype="rdata" value="cluster_seurat.rds" compare="sim_size"/> |
| 83 <output name="output_tab" value="clusters.txt" compare="sim_size" delta="1000000" /> | |
| 83 </test> | 84 </test> |
| 84 </tests> | 85 </tests> |
| 85 <help><![CDATA[ | 86 <help><![CDATA[ |
| 86 .. class:: infomark | 87 .. class:: infomark |
| 87 | 88 |