Mercurial > repos > ebi-gxa > seurat_normalise_data
comparison seurat_normalise_data.xml @ 5:a835b38e389f draft
"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/ commit 355bb52d2e9d170b1db237e649657cc14e0a047a"
| author | ebi-gxa |
|---|---|
| date | Fri, 04 Mar 2022 07:26:56 +0000 |
| parents | c5d4fce10c45 |
| children |
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| 4:c5d4fce10c45 | 5:a835b38e389f |
|---|---|
| 1 <tool id="seurat_normalise_data" name="Seurat NormaliseData" version="@SEURAT_VERSION@+galaxy0"> | 1 <tool id="seurat_normalise_data" name="Seurat NormaliseData" profile="18.01" version="@SEURAT_VERSION@+galaxy0"> |
| 2 <description>normalise data</description> | 2 <description>normalise data</description> |
| 3 <macros> | 3 <macros> |
| 4 <import>seurat_macros.xml</import> | 4 <import>seurat_macros.xml</import> |
| 5 </macros> | 5 </macros> |
| 6 <expand macro="requirements" /> | 6 <expand macro="requirements" /> |
| 39 <expand macro="output_files"/> | 39 <expand macro="output_files"/> |
| 40 </outputs> | 40 </outputs> |
| 41 | 41 |
| 42 <tests> | 42 <tests> |
| 43 <test> | 43 <test> |
| 44 <param name="rds_seurat_file" ftype="rdata" value="filtered_seurat.rds"/> | 44 <param name="rds_seurat_file" ftype="rdata" value="E-MTAB-6077-3k_features_90_cells.rds"/> |
| 45 <output name="rds_seurat_file" ftype="rdata" value="normalised_seurat.rds" compare="sim_size" delta="1000000"/> | 45 <output name="rds_seurat_file" ftype="rdata"> |
| 46 <assert_contents> | |
| 47 <has_size value="2720178" delta="200000"/> | |
| 48 </assert_contents> | |
| 49 </output> | |
| 46 </test> | 50 </test> |
| 47 </tests> | 51 </tests> |
| 48 <help><![CDATA[ | 52 <help><![CDATA[ |
| 49 .. class:: infomark | 53 .. class:: infomark |
| 50 | 54 |