Mercurial > repos > ebi-gxa > suite_scanpy_scripts

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planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/tertiary-analysis/scanpy commit edcca4677d954001b33ad15e22603ea452031d76
author ebi-gxa
date Wed, 11 Mar 2020 06:47:03 -0400
parents 334e9855b3ee
children 3c52835d3835
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13:334e9855b3ee 14:1e488756189f
1 <?xml version="1.0" ?> 1 <?xml version="1.0" ?>
2 <repositories description="scanpy-scripts, command-line wrappers around Scanpy."> 2 <repositories description="scanpy-scripts, command-line wrappers around Scanpy.">
3 <repository changeset_revision="93680e2ff8f4" name="scanpy_parameter_iterator" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 3 <repository changeset_revision="40feaaed47cf" name="scanpy_parameter_iterator" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
4 <repository changeset_revision="1d0e587bdd60" name="scanpy_plot_trajectory" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 4 <repository changeset_revision="2d00acd70129" name="scanpy_plot_trajectory" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
5 <repository changeset_revision="91157b3432df" name="scanpy_regress_variable" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 5 <repository changeset_revision="99c7380fae41" name="scanpy_regress_variable" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
6 <repository changeset_revision="3636ec97f3af" name="scanpy_normalise_data" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 6 <repository changeset_revision="a97c37e0309a" name="scanpy_normalise_data" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
7 <repository changeset_revision="1618435e2a33" name="scanpy_run_pca" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 7 <repository changeset_revision="2dd53b944e78" name="scanpy_run_pca" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
8 <repository changeset_revision="377224a3cd1d" name="scanpy_find_markers" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 8 <repository changeset_revision="0d63195a9b9f" name="scanpy_find_markers" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
9 <repository changeset_revision="6a9e2be28b07" name="scanpy_find_cluster" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 9 <repository changeset_revision="e4006a341f74" name="scanpy_find_cluster" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
10 <repository changeset_revision="eabf8e76e007" name="scanpy_scale_data" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 10 <repository changeset_revision="1bb1d4419c48" name="scanpy_scale_data" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
11 <repository changeset_revision="98f37271c17c" name="anndata_ops" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 11 <repository changeset_revision="35422e51b804" name="anndata_ops" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
12 <repository changeset_revision="6ac8b9a3a279" name="scanpy_filter_genes" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 12 <repository changeset_revision="c678f671e151" name="scanpy_filter_genes" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
13 <repository changeset_revision="6c40cc3e9dc0" name="scanpy_run_fdg" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 13 <repository changeset_revision="425f2e046231" name="scanpy_run_fdg" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
14 <repository changeset_revision="41f6078040da" name="scanpy_run_umap" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 14 <repository changeset_revision="b282c349bd67" name="scanpy_run_umap" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
15 <repository changeset_revision="299aca1029a1" name="scanpy_run_dpt" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 15 <repository changeset_revision="eb764ec05bb9" name="scanpy_run_dpt" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
16 <repository changeset_revision="af9b447bcde8" name="scanpy_run_tsne" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 16 <repository changeset_revision="e61ba8b05578" name="scanpy_run_tsne" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
17 <repository changeset_revision="d811772b94d7" name="scanpy_run_paga" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 17 <repository changeset_revision="eba43c4d86b9" name="scanpy_run_paga" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
18 <repository changeset_revision="452e0f19c2a2" name="scanpy_plot_embed" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 18 <repository changeset_revision="210026a1a50a" name="scanpy_plot_embed" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
19 <repository changeset_revision="3f8d10b43598" name="scanpy_run_diffmap" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 19 <repository changeset_revision="c869331377bf" name="scanpy_run_diffmap" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
20 <repository changeset_revision="fe740b19e3b9" name="scanpy_compute_graph" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 20 <repository changeset_revision="c938bef2ca98" name="scanpy_compute_graph" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
21 <repository changeset_revision="7757f4b43174" name="scanpy_read_10x" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 21 <repository changeset_revision="3ffd959f55f4" name="scanpy_read_10x" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
22 <repository changeset_revision="7a68f44c866b" name="scanpy_find_variable_genes" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 22 <repository changeset_revision="1c59a010bb44" name="scanpy_find_variable_genes" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
23 <repository changeset_revision="3c3c254c9deb" name="scanpy_filter_cells" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 23 <repository changeset_revision="3dcc1629e420" name="scanpy_filter_cells" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
24 </repositories> 24 </repositories>