Mercurial > repos > ebi-gxa > suite_scanpy_scripts
comparison repository_dependencies.xml @ 21:3dc687e346a1 draft
"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/tertiary-analysis/scanpy commit 62f47287c7e8449c59a1f1f454852ddc669b1b1e-dirty"
author | ebi-gxa |
---|---|
date | Mon, 07 Sep 2020 14:03:31 +0000 |
parents | f007e68ed3c1 |
children | 10a498b5556a |
comparison
equal
deleted
inserted
replaced
20:f007e68ed3c1 | 21:3dc687e346a1 |
---|---|
1 <?xml version="1.0" ?> | 1 <?xml version="1.0" ?> |
2 <repositories description="scanpy-scripts, command-line wrappers around Scanpy."> | 2 <repositories description="scanpy-scripts, command-line wrappers around Scanpy."> |
3 <repository changeset_revision="b456d129066d" name="scanpy_find_cluster" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> | 3 <repository owner="ebi-gxa" name="scanpy_parameter_iterator" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="f2410ed604dc"/> |
4 <repository changeset_revision="068c4bf0e0db" name="scanpy_plot_embed" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> | 4 <repository owner="ebi-gxa" name="scanpy_plot_trajectory" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="c646bd10dcab"/> |
5 <repository changeset_revision="da8c130348b6" name="scanpy_filter_cells" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> | 5 <repository owner="ebi-gxa" name="scanpy_regress_variable" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="e277d77dc6da"/> |
6 <repository changeset_revision="6953c7e519cd" name="scanpy_filter_genes" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> | 6 <repository owner="ebi-gxa" name="scanpy_normalise_data" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="6aa97861fdfd"/> |
7 <repository changeset_revision="4722394f6af9" name="scanpy_run_fdg" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> | 7 <repository owner="ebi-gxa" name="scanpy_run_pca" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="3e7ede8e1c94"/> |
8 <repository changeset_revision="47c747351d62" name="scanpy_normalise_data" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> | 8 <repository owner="ebi-gxa" name="scanpy_integrate_bbknn" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="e6d5b3fed639"/> |
9 <repository changeset_revision="f10df597ed6d" name="scanpy_run_diffmap" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> | 9 <repository owner="ebi-gxa" name="scanpy_find_markers" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="f6291dbb3afc"/> |
10 <repository changeset_revision="c99f397434a3" name="scanpy_plot_trajectory" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> | 10 <repository owner="ebi-gxa" name="scanpy_find_cluster" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="c46750e2e4a4"/> |
11 <repository changeset_revision="aee7b7f9cae3" name="scanpy_run_pca" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> | 11 <repository owner="ebi-gxa" name="scanpy_scale_data" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="83db723bc0e1"/> |
12 <repository changeset_revision="ea8fd43b7e1e" name="scanpy_scale_data" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> | 12 <repository owner="ebi-gxa" name="scanpy_integrate_combat" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="2472523c0c50"/> |
13 <repository changeset_revision="1ab80fc6f667" name="scanpy_run_dpt" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> | 13 <repository owner="ebi-gxa" name="anndata_ops" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="f1a1cf7c0153"/> |
14 <repository changeset_revision="7c4d44c14ceb" name="scanpy_parameter_iterator" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> | 14 <repository owner="ebi-gxa" name="scanpy_filter_genes" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="fc5b3e76131b"/> |
15 <repository changeset_revision="f0a29f4b9be9" name="anndata_ops" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> | 15 <repository owner="ebi-gxa" name="scanpy_run_fdg" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="dd27b39c5c12"/> |
16 <repository changeset_revision="a597590ccf6c" name="scanpy_run_tsne" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> | 16 <repository owner="ebi-gxa" name="scanpy_run_umap" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="f53bb2c1fa07"/> |
17 <repository changeset_revision="af9cf232d6c9" name="scanpy_find_markers" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> | 17 <repository owner="ebi-gxa" name="scanpy_run_dpt" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="820493156c4a"/> |
18 <repository changeset_revision="ed2231b3edff" name="scanpy_run_paga" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> | 18 <repository owner="ebi-gxa" name="scanpy_run_tsne" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="dccd544c21ca"/> |
19 <repository changeset_revision="232937b5bb8f" name="scanpy_compute_graph" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> | 19 <repository owner="ebi-gxa" name="scanpy_integrate_mnn" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="873449082a29"/> |
20 <repository changeset_revision="7793c8284aa5" name="scanpy_find_variable_genes" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> | 20 <repository owner="ebi-gxa" name="scanpy_integrate_harmony" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="8b3a52fbb482"/> |
21 <repository changeset_revision="9e92447122a6" name="scanpy_regress_variable" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> | 21 <repository owner="ebi-gxa" name="scanpy_run_paga" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="a1a7650c5cf2"/> |
22 <repository changeset_revision="d92e6f12b790" name="scanpy_read_10x" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> | 22 <repository owner="ebi-gxa" name="scanpy_plot_embed" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="f48cfaa2e515"/> |
23 <repository changeset_revision="10893b1647ff" name="scanpy_run_umap" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> | 23 <repository owner="ebi-gxa" name="scanpy_run_diffmap" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="26e1a99e3c0f"/> |
24 <repository owner="ebi-gxa" name="scanpy_compute_graph" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="c78c930e3263"/> | |
25 <repository owner="ebi-gxa" name="scanpy_read_10x" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="5ff50f4a26cd"/> | |
26 <repository owner="ebi-gxa" name="scanpy_find_variable_genes" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="f952b39f0794"/> | |
27 <repository owner="ebi-gxa" name="scanpy_filter_cells" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="cf3fb754ddde"/> | |
24 </repositories> | 28 </repositories> |