Mercurial > repos > ebi-gxa > suite_scanpy_scripts

comparison repository_dependencies.xml @ 16:79ca3fc60f11 draft

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"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/tertiary-analysis/scanpy commit 121972f836fc6f5a60390abcdc1e2fe904b79072"
author ebi-gxa
date Fri, 05 Jun 2020 09:14:23 -0400
parents 3c52835d3835
children 1399393a7aae
comparison
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15:3c52835d3835 16:79ca3fc60f11
1 <?xml version="1.0" ?> 1 <?xml version="1.0" ?>
2 <repositories description="scanpy-scripts, command-line wrappers around Scanpy."> 2 <repositories description="scanpy-scripts, command-line wrappers around Scanpy.">
3 <repository changeset_revision="2704d80b7e91" name="scanpy_find_cluster" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 3 <repository changeset_revision="b456d129066d" name="scanpy_find_cluster" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
4 <repository changeset_revision="68e82882a8f9" name="scanpy_plot_embed" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 4 <repository changeset_revision="068c4bf0e0db" name="scanpy_plot_embed" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
5 <repository changeset_revision="598f6161a665" name="scanpy_filter_cells" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 5 <repository changeset_revision="da8c130348b6" name="scanpy_filter_cells" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
6 <repository changeset_revision="303c559f4e1f" name="scanpy_filter_genes" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 6 <repository changeset_revision="6953c7e519cd" name="scanpy_filter_genes" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
7 <repository changeset_revision="a82c905e2c26" name="scanpy_run_fdg" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 7 <repository changeset_revision="4722394f6af9" name="scanpy_run_fdg" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
8 <repository changeset_revision="978bd87a87c2" name="scanpy_normalise_data" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 8 <repository changeset_revision="47c747351d62" name="scanpy_normalise_data" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
9 <repository changeset_revision="1709957891e5" name="scanpy_run_diffmap" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 9 <repository changeset_revision="f10df597ed6d" name="scanpy_run_diffmap" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
10 <repository changeset_revision="eb10fa649a7e" name="scanpy_plot_trajectory" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 10 <repository changeset_revision="c99f397434a3" name="scanpy_plot_trajectory" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
11 <repository changeset_revision="4a54b92af339" name="scanpy_run_pca" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 11 <repository changeset_revision="aee7b7f9cae3" name="scanpy_run_pca" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
12 <repository changeset_revision="87a02d83b6f5" name="scanpy_scale_data" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 12 <repository changeset_revision="ea8fd43b7e1e" name="scanpy_scale_data" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
13 <repository changeset_revision="8a6860957c84" name="scanpy_run_dpt" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 13 <repository changeset_revision="1ab80fc6f667" name="scanpy_run_dpt" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
14 <repository changeset_revision="25e0b1fd2d05" name="scanpy_parameter_iterator" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 14 <repository changeset_revision="645f12f44a6d" name="scanpy_parameter_iterator" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
15 <repository changeset_revision="265348777440" name="anndata_ops" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 15 <repository changeset_revision="d868221262d5" name="anndata_ops" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
16 <repository changeset_revision="d525452f8f2f" name="scanpy_run_tsne" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 16 <repository changeset_revision="a597590ccf6c" name="scanpy_run_tsne" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
17 <repository changeset_revision="f00adc96e0bf" name="scanpy_find_markers" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 17 <repository changeset_revision="af9cf232d6c9" name="scanpy_find_markers" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
18 <repository changeset_revision="fdaf18739b31" name="scanpy_run_paga" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 18 <repository changeset_revision="ed2231b3edff" name="scanpy_run_paga" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
19 <repository changeset_revision="3bce5710a90b" name="scanpy_compute_graph" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 19 <repository changeset_revision="232937b5bb8f" name="scanpy_compute_graph" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
20 <repository changeset_revision="710530217502" name="scanpy_find_variable_genes" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 20 <repository changeset_revision="7793c8284aa5" name="scanpy_find_variable_genes" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
21 <repository changeset_revision="866ea2391985" name="scanpy_regress_variable" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 21 <repository changeset_revision="9e92447122a6" name="scanpy_regress_variable" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
22 <repository changeset_revision="247e401d454f" name="scanpy_read_10x" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 22 <repository changeset_revision="d92e6f12b790" name="scanpy_read_10x" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
23 <repository changeset_revision="676e2964920a" name="scanpy_run_umap" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 23 <repository changeset_revision="10893b1647ff" name="scanpy_run_umap" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
24 </repositories> 24 </repositories>