Mercurial > repos > ebi-gxa > suite_scanpy_scripts

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planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/tertiary-analysis/scanpy commit 1d069e25584e436d7628694cb8853a15f1f85604
author ebi-gxa
date Wed, 20 Nov 2019 05:19:06 -0500
parents 64c2046e4d6c
children 5b96235893bb
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6:64c2046e4d6c 7:7b62c2a0bc2e
1 <?xml version="1.0" ?> 1 <?xml version="1.0" ?>
2 <repositories description="scanpy-scripts, command-line wrappers around Scanpy."> 2 <repositories description="scanpy-scripts, command-line wrappers around Scanpy.">
3 <repository changeset_revision="f0dd61087af3" name="scanpy_parameter_iterator" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 3 <repository changeset_revision="ec800d531617" name="scanpy_parameter_iterator" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
4 <repository changeset_revision="8e2fc37c3e0c" name="scanpy_plot_trajectory" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 4 <repository changeset_revision="63cbe6d65e67" name="scanpy_plot_trajectory" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
5 <repository changeset_revision="b8f8890d95e4" name="scanpy_regress_variable" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 5 <repository changeset_revision="2131ec9d52e2" name="scanpy_regress_variable" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
6 <repository changeset_revision="f7322b68cc90" name="scanpy_normalise_data" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 6 <repository changeset_revision="1442daff0c7c" name="scanpy_normalise_data" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
7 <repository changeset_revision="8b4dae3748d3" name="scanpy_run_pca" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 7 <repository changeset_revision="c990e40fbd46" name="scanpy_run_pca" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
8 <repository changeset_revision="c18f446dcfbf" name="scanpy_find_markers" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 8 <repository changeset_revision="23939bfeee92" name="scanpy_find_markers" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
9 <repository changeset_revision="455846afcc73" name="scanpy_find_cluster" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 9 <repository changeset_revision="ab7a3bb8a622" name="scanpy_find_cluster" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
10 <repository changeset_revision="4c73b070cbff" name="scanpy_scale_data" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 10 <repository changeset_revision="c8f196ccf34a" name="scanpy_scale_data" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
11 <repository changeset_revision="fa6c08064fc1" name="scanpy_filter_genes" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 11 <repository changeset_revision="339d205356c6" name="anndata_ops" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
12 <repository changeset_revision="4c38558f0e7c" name="scanpy_run_fdg" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 12 <repository changeset_revision="f1e4de78d768" name="scanpy_filter_genes" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
13 <repository changeset_revision="c111d7d04f0b" name="scanpy_run_umap" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 13 <repository changeset_revision="d929261bc28c" name="scanpy_run_fdg" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
14 <repository changeset_revision="e82f42730fa1" name="scanpy_run_dpt" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 14 <repository changeset_revision="3bd1152dd854" name="scanpy_run_umap" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
15 <repository changeset_revision="3589dfaef3f6" name="scanpy_run_tsne" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 15 <repository changeset_revision="202e28c59b59" name="scanpy_run_dpt" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
16 <repository changeset_revision="a12f0d1b0fac" name="scanpy_run_paga" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 16 <repository changeset_revision="45674f057a31" name="scanpy_run_tsne" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
17 <repository changeset_revision="882f4671d686" name="scanpy_plot_embed" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 17 <repository changeset_revision="fa114efdb1e7" name="scanpy_run_paga" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
18 <repository changeset_revision="a05d2553484e" name="scanpy_run_diffmap" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 18 <repository changeset_revision="b2410da4e381" name="scanpy_plot_embed" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
19 <repository changeset_revision="6b2673e1f4c6" name="scanpy_compute_graph" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 19 <repository changeset_revision="8e45c89adab2" name="scanpy_run_diffmap" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
20 <repository changeset_revision="cf55e0e462da" name="scanpy_read_10x" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 20 <repository changeset_revision="aada17e5da75" name="scanpy_compute_graph" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
21 <repository changeset_revision="321f1b073cbc" name="scanpy_find_variable_genes" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 21 <repository changeset_revision="741d50b6dc78" name="scanpy_read_10x" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
22 <repository changeset_revision="8e48fa9618c1" name="scanpy_filter_cells" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/> 22 <repository changeset_revision="258e13397a8a" name="scanpy_find_variable_genes" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
23 <repository changeset_revision="1b0fdf08a454" name="scanpy_filter_cells" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
23 </repositories> 24 </repositories>