Mercurial > repos > ebi-gxa > suite_scanpy_scripts

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planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/tertiary-analysis/scanpy commit 0a162684a5859a53eefb14af11ba8ec64d42b213
author ebi-gxa
date Wed, 20 Nov 2019 05:51:09 -0500
parents 7b62c2a0bc2e
children 50ab79759971
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<?xml version="1.0" ?>
<repositories description="scanpy-scripts, command-line wrappers around Scanpy.">
    <repository changeset_revision="ec800d531617" name="scanpy_parameter_iterator" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="63cbe6d65e67" name="scanpy_plot_trajectory" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="2131ec9d52e2" name="scanpy_regress_variable" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="1442daff0c7c" name="scanpy_normalise_data" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="c990e40fbd46" name="scanpy_run_pca" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="23939bfeee92" name="scanpy_find_markers" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="ab7a3bb8a622" name="scanpy_find_cluster" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="c8f196ccf34a" name="scanpy_scale_data" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="339d205356c6" name="anndata_ops" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="cb55f68ea1d7" name="scanpy_filter_genes" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="d929261bc28c" name="scanpy_run_fdg" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="3bd1152dd854" name="scanpy_run_umap" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="202e28c59b59" name="scanpy_run_dpt" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="45674f057a31" name="scanpy_run_tsne" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="fa114efdb1e7" name="scanpy_run_paga" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="b2410da4e381" name="scanpy_plot_embed" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="8e45c89adab2" name="scanpy_run_diffmap" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="aada17e5da75" name="scanpy_compute_graph" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="741d50b6dc78" name="scanpy_read_10x" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="258e13397a8a" name="scanpy_find_variable_genes" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
    <repository changeset_revision="9b2072ee4bdd" name="scanpy_filter_cells" owner="ebi-gxa" toolshed="https://toolshed.g2.bx.psu.edu"/>
</repositories>