Mercurial > repos > ebi-gxa > suite_scanpy_scripts

changeset 25:027e7987d589 draft

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"planemo upload for repository https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/tertiary-analysis/scanpy commit 2db9e8cecb8d373874318e53ec2d4d7a64dd1b24-dirty"
author ebi-gxa
date Fri, 11 Sep 2020 11:07:18 +0000
parents 51ad642c5dbb
children 36356605aee2
files repository_dependencies.xml
diffstat 1 files changed, 24 insertions(+), 24 deletions(-) [+]
line wrap: on
line diff
--- a/repository_dependencies.xml	Thu Sep 10 08:48:36 2020 +0000
+++ b/repository_dependencies.xml	Fri Sep 11 11:07:18 2020 +0000
@@ -1,28 +1,28 @@
 <?xml version="1.0" ?>
 <repositories description="scanpy-scripts, command-line wrappers around Scanpy.">
-    <repository owner="ebi-gxa" name="scanpy_parameter_iterator" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="ffe34d7edf74"/>
-    <repository owner="ebi-gxa" name="scanpy_plot_trajectory" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="746a0de8b12b"/>
-    <repository owner="ebi-gxa" name="scanpy_regress_variable" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="271dc9aedb27"/>
-    <repository owner="ebi-gxa" name="scanpy_normalise_data" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="e81a4512a057"/>
-    <repository owner="ebi-gxa" name="scanpy_run_pca" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="a8f94e4a2526"/>
-    <repository owner="ebi-gxa" name="scanpy_integrate_bbknn" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="0654c7737e2d"/>
-    <repository owner="ebi-gxa" name="scanpy_find_markers" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="c6fb86cc7de5"/>
-    <repository owner="ebi-gxa" name="scanpy_find_cluster" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="25e479cd340e"/>
-    <repository owner="ebi-gxa" name="scanpy_scale_data" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="3b50db496591"/>
-    <repository owner="ebi-gxa" name="scanpy_integrate_combat" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="ced09c5acba5"/>
-    <repository owner="ebi-gxa" name="anndata_ops" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="35ee5e3e87c1"/>
-    <repository owner="ebi-gxa" name="scanpy_filter_genes" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="bac969abf1c6"/>
-    <repository owner="ebi-gxa" name="scanpy_run_fdg" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="260c8932c0b7"/>
-    <repository owner="ebi-gxa" name="scanpy_run_umap" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="fb50577dc31d"/>
-    <repository owner="ebi-gxa" name="scanpy_run_dpt" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="af4ee7300107"/>
-    <repository owner="ebi-gxa" name="scanpy_run_tsne" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="6ea0bafd53e4"/>
-    <repository owner="ebi-gxa" name="scanpy_integrate_mnn" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="7ae183da3f07"/>
-    <repository owner="ebi-gxa" name="scanpy_integrate_harmony" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="f1298838e93b"/>
-    <repository owner="ebi-gxa" name="scanpy_run_paga" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="607408d09a36"/>
-    <repository owner="ebi-gxa" name="scanpy_plot_embed" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="e9f7c33e2b46"/>
-    <repository owner="ebi-gxa" name="scanpy_run_diffmap" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="cae3f94c5b4c"/>
+    <repository owner="ebi-gxa" name="scanpy_integrate_harmony" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="739f68e3cbca"/>
+    <repository owner="ebi-gxa" name="scanpy_integrate_combat" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="0752a5c8a9da"/>
+    <repository owner="ebi-gxa" name="scanpy_find_cluster" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="ed07813a7266"/>
+    <repository owner="ebi-gxa" name="scanpy_plot_embed" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="f8b5478a9fdf"/>
+    <repository owner="ebi-gxa" name="scanpy_filter_cells" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="e05cafd4e2b2"/>
+    <repository owner="ebi-gxa" name="scanpy_filter_genes" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="083418c42b90"/>
+    <repository owner="ebi-gxa" name="scanpy_run_fdg" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="885681d258b4"/>
+    <repository owner="ebi-gxa" name="scanpy_integrate_mnn" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="dc7fa97154f1"/>
+    <repository owner="ebi-gxa" name="scanpy_normalise_data" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="7852b823ad45"/>
+    <repository owner="ebi-gxa" name="scanpy_run_diffmap" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="900b3c31fd3a"/>
+    <repository owner="ebi-gxa" name="scanpy_plot_trajectory" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="0cb36b79741e"/>
+    <repository owner="ebi-gxa" name="scanpy_run_pca" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="f7ce9ed8a4f3"/>
+    <repository owner="ebi-gxa" name="scanpy_scale_data" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="29a69127061f"/>
+    <repository owner="ebi-gxa" name="scanpy_run_dpt" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="730d098a9f23"/>
+    <repository owner="ebi-gxa" name="scanpy_parameter_iterator" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="fb354a78d4ae"/>
+    <repository owner="ebi-gxa" name="anndata_ops" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="a4ad76e3dc4a"/>
+    <repository owner="ebi-gxa" name="scanpy_integrate_bbknn" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="26805c747e15"/>
+    <repository owner="ebi-gxa" name="scanpy_run_tsne" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="c4a20a57d825"/>
+    <repository owner="ebi-gxa" name="scanpy_find_markers" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="fb9bd74c32b0"/>
+    <repository owner="ebi-gxa" name="scanpy_run_paga" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="f6148c49ff8b"/>
     <repository owner="ebi-gxa" name="scanpy_compute_graph" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="c78c930e3263"/>
-    <repository owner="ebi-gxa" name="scanpy_read_10x" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="8efba12e8f58"/>
-    <repository owner="ebi-gxa" name="scanpy_find_variable_genes" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="478578da6fbf"/>
-    <repository owner="ebi-gxa" name="scanpy_filter_cells" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="642938f557e1"/>
+    <repository owner="ebi-gxa" name="scanpy_find_variable_genes" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="5663eb6b965c"/>
+    <repository owner="ebi-gxa" name="scanpy_regress_variable" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="63e18d37228d"/>
+    <repository owner="ebi-gxa" name="scanpy_read_10x" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="72cf1c8f5870"/>
+    <repository owner="ebi-gxa" name="scanpy_run_umap" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="62c31dc2e5d5"/>
 </repositories>
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