Mercurial > repos > edward-kirton > abyss_toolsuite
comparison abyss/abyss_wrapper.sh @ 0:92636934a189 default tip
Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
author | edward-kirton |
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date | Tue, 07 Jun 2011 17:49:27 -0400 |
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-1:000000000000 | 0:92636934a189 |
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1 #!/bin/bash | |
2 | |
3 if [ $# -ne 3 ] | |
4 then | |
5 echo "ERROR: Expected exactly 3 arguments; got: $*" 1>&2 | |
6 exit 1 | |
7 fi | |
8 | |
9 CMD=`ABYSS -k$1 $2 -o $3 2>&1` | |
10 if [ $? -ne 0 ] | |
11 then | |
12 { | |
13 echo "COMMAND FAILURE: $CMD" 1>&2 | |
14 exit $? | |
15 } | |
16 fi |