Mercurial > repos > edward-kirton > abyss_toolsuite
diff abyss/abyss_wrapper.sh @ 0:92636934a189 default tip
Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
author | edward-kirton |
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date | Tue, 07 Jun 2011 17:49:27 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/abyss/abyss_wrapper.sh Tue Jun 07 17:49:27 2011 -0400 @@ -0,0 +1,16 @@ +#!/bin/bash + +if [ $# -ne 3 ] +then + echo "ERROR: Expected exactly 3 arguments; got: $*" 1>&2 + exit 1 +fi + +CMD=`ABYSS -k$1 $2 -o $3 2>&1` +if [ $? -ne 0 ] +then +{ + echo "COMMAND FAILURE: $CMD" 1>&2 + exit $? +} +fi