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annotate roche454/README @ 0:f036c7107601

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Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
author edward-kirton
date Tue, 07 Jun 2011 17:50:32 -0400
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f036c7107601 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
edward-kirton
parents:
diff changeset
1 - Newbler requires a license and the executables are not included here
f036c7107601 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
edward-kirton
parents:
diff changeset
2 - the Newbler tool config files include options to support multiple versions of Newbler; you'll need to add the paths to
f036c7107601 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
edward-kirton
parents:
diff changeset
3 the XML file if you wish to use this feature. Or, just remove this parameter entirely. Note the wrapper is expecting the
f036c7107601 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
edward-kirton
parents:
diff changeset
4 executable as the first argument.
f036c7107601 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
edward-kirton
parents:
diff changeset
5 - the SFF->Fastq converter requires the executable "fasta_qual_to_fastq" is installed; replace with whatever converter
f036c7107601 Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository
edward-kirton
parents:
diff changeset
6 you have installed in the perl script.