annotate test-data/samtools_flagstat.txt @ 11:e18704835dfd
draft
Updated from github with appropriate url
| author |
engineson |
| date |
Fri, 07 Jul 2017 07:56:04 -0400 |
| parents |
c503e1c1fbad |
| children |
|
| rev |
line source |
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8
|
1 21040602 + 0 in total (QC-passed reads + QC-failed reads)
|
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2 0 + 0 secondary
|
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3 0 + 0 supplementary
|
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4 5448463 + 0 duplicates
|
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5 20689039 + 0 mapped (98.33%:-nan%)
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6 0 + 0 paired in sequencing
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7 0 + 0 read1
|
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8 0 + 0 read2
|
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9 0 + 0 properly paired (-nan%:-nan%)
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10 0 + 0 with itself and mate mapped
|
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11 0 + 0 singletons (-nan%:-nan%)
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12 0 + 0 with mate mapped to a different chr
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13 0 + 0 with mate mapped to a different chr (mapQ>=5)
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