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5
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1 #This file lists the locations and dbkeys of all the fasta files
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2 #under the "genome" directory (a directory that contains a directory
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3 #for each build). The script extract_fasta.py will generate the file
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4 #all_fasta.loc.
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5 #IMPORTANT: EACH LINE OF THIS FILE HAS TO BE TAB-DELIMITED!
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6 #
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7 #<unique_build_id> <dbkey> <display_name> <file_path>
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8 #
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9 #So, all_fasta.loc could look something like this:
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10 #
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11 #ncbi_refseq_complete_viruses ncbi_refseq_complete_viruses RefSeq complete viruses /path/to/ncbi_refseq_complete_viruses.fna
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12 #ncbi_refseq_complete_microbes ncbi_refseq_complete_microbes RefSeq complete microbes /path/to/ncbi_refseq_complete_microbes.fna
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13 #homo_sapiens_GRCh37 homo_sapiens_GRCh37 Homo sapiens genome /path/to/Homo_sapiens_GRCh37_reference.fna
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14 #gg_named_16S gg_named_16S GreenGenes named 16S strains /path/to/Isolated_named_strains_16S.fna
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15
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