Mercurial > repos > fubar > jbrowse2

changeset 75:9c8459ce7d88 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse2 commit d03454f949af9f3fff638f6a3e52fe42bc96be3b-dirty
author fubar
date Mon, 01 Apr 2024 04:03:16 +0000
parents 13ede71c3a4b
children 9e3eb6b26f85
files jbrowse2.py
diffstat 1 files changed, 2 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/jbrowse2.py	Mon Apr 01 03:56:37 2024 +0000
+++ b/jbrowse2.py	Mon Apr 01 04:03:16 2024 +0000
@@ -1487,7 +1487,8 @@
         session_spec = {"views": []}
         logging.debug("def ass_first=%s\ndata=%s" % (self.ass_first_contigs, data))
         for first_contig in self.ass_first_contigs:
-            gnome, refName, end = first_contig
+            logging.debug("first contig=%s" % self.ass_first_contigs)
+            [gnome, refName, end] = first_contig
             start = 0
             if False or data.get("defaultLocation", ""):
                 loc_match = re.search(