annotate planemo_lint/planemo_lint.xml @ 1:0183cad9d13b draft

planemo upload
author fubar
date Thu, 22 Feb 2024 10:48:01 +0000
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1 <tool name="planemo_lint" id="planemo_lint" version="0.75.20" profile="22.05">
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2 <!--Source in git at: https://github.com/fubar2/galaxy_tf_overlay-->
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3 <!--Created by toolfactory@galaxy.org at 05/02/2024 14:19:29 using the Galaxy Tool Factory.-->
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4 <description></description>
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5 <requirements>
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6 <requirement version="0.75.20" type="package">planemo</requirement>
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7 </requirements>
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8 <version_command><![CDATA[echo "0.75.20"]]></version_command>
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9 <command><![CDATA[bash
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10 '$runme'
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11 $Toolshed_archive_to_be_linted
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12 $lint_output]]></command>
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13 <configfiles>
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14 <configfile name="runme"><![CDATA[#raw
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15 cp $1 foo.tar
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16 tar -xvf foo.tar
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17 TOOLNAME=`find . -name "*.xml"`
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18 echo "$$$$$TOOLNAME = $TOOLNAME" > $2
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19 planemo lint $TOOLNAME >> $2
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20 #end raw]]></configfile>
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21 </configfiles>
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22 <inputs>
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23 <param name="Toolshed_archive_to_be_linted" type="data" optional="false" label="Toolshed archive to be linted" help="" format="tgz" multiple="false"/>
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24 </inputs>
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25 <outputs>
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26 <data name="lint_output" format="txt" label="lint_output" hidden="false"/>
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27 </outputs>
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28 <tests>
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29 <test>
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30 <output name="lint_output" value="lint_output_sample" compare="diff" lines_diff="5"/>
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31 <param name="Toolshed_archive_to_be_linted" value="Toolshed_archive_to_be_linted_sample"/>
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32 </test>
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33 </tests>
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34 <help><![CDATA[
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35 **What it Does**
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36 ]]></help>
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37 <citations>
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38 <citation type="doi">10.1093/bioinformatics/bts573</citation>
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39 </citations>
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40 </tool>
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