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annotate mashmap.bash.txt @ 2:6c6bf2bee1ca draft

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planemo upload
author fubar
date Thu, 22 Feb 2024 10:49:45 +0000
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Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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1 #raw
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2 rm -rf 'reflist'
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3 #for i, mash in enumerate($reflist):
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4 #if i == 0:
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5 echo $mash > 'reflist'
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6 #else:
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7 echo $mash >> 'reflist'
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8 #end if
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9 #end for
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10 mashmap -rl 'reflist' -q '$query' > $mashout
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11 #end raw