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comparison mashmap.bash.txt @ 2:6c6bf2bee1ca draft

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planemo upload
author fubar
date Thu, 22 Feb 2024 10:49:45 +0000
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1:0183cad9d13b 2:6c6bf2bee1ca
1 #raw
2 rm -rf 'reflist'
3 #for i, mash in enumerate($reflist):
4 #if i == 0:
5 echo $mash > 'reflist'
6 #else:
7 echo $mash >> 'reflist'
8 #end if
9 #end for
10 mashmap -rl 'reflist' -q '$query' > $mashout
11 #end raw