Mercurial > repos > fubar > microsatbed

diff find_str.py @ 17:264d79548d19 draft

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planemo upload for repository https://github.com/fubar2/microsatbed commit d952bc313f408735456747c3d33e09a3170c8f59-dirty
author fubar
date Wed, 17 Jul 2024 06:08:33 +0000
parents ee773bbde3c3
children db5523378e5c
line wrap: on
line diff
--- a/find_str.py	Wed Jul 17 05:08:00 2024 +0000
+++ b/find_str.py	Wed Jul 17 06:08:33 2024 +0000
@@ -27,12 +27,12 @@
             ssrs = pytrf.STRFinder(
                 name,
                 seq,
-                2,
-                1,
-                2,
-                2,
-                2,
-                2,
+                args.monomin,
+                args.dimin,
+                args.trimin,
+                args.tetramin,
+                args.pentamin,
+                args.hexamin,
             )
         else:
             ssrs = pytrf.STRFinder(