view test-data/test.blobDB.json @ 0:234b3e869b16 draft default tip

"planemo upload for repository https://github.com/usegalaxy-au/tools-au/tree/master/tools/blobtools commit 89d41433582a6470135c026aad07b714eb3145d4"
author galaxy-australia
date Wed, 26 Oct 2022 06:54:04 +0000
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{"title": "example/test.blobDB.json", "assembly_f": "/home/mthang/tools/blobtools/example/assembly.fna", "lineages": {"979556": {"species": "Microbacterium testaceum", "genus": "Microbacterium", "family": "Microbacteriaceae", "order": "Micrococcales", "phylum": "Actinobacteria", "superkingdom": "Bacteria"}, "6252": {"species": "Ascaris lumbricoides", "genus": "Ascaris", "family": "Ascarididae", "order": "Rhabditida", "phylum": "Nematoda", "superkingdom": "Eukaryota"}, "232323": {"species": "Hypsibius dujardini", "genus": "Hypsibius", "family": "Hypsibiidae", "order": "Parachela", "phylum": "Tardigrada", "superkingdom": "Eukaryota"}}, "order_of_blobs": ["contig_1", "contig_2", "contig_3", "contig_4", "contig_5", "contig_6", "contig_7", "contig_8", "contig_9", "contig_10"], "dict_of_blobs": {"contig_1": {"name": "contig_1", "length": 756, "n_count": 0, "agct_count": 756, "gc": 0.2606, "covs": {"bam0": 120.8277}, "read_cov": {"bam0": 369}, "hits": {"tax0": [{"name": "contig_1", "taxId": 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