view fasta_merge_files_and_filter_unique_sequences.xml @ 1:74144834b0bd draft

planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fasta_merge_files_and_filter_unique_sequences commit 9f9eba8df62b4db1ef35718d880a1bcda7457b99

<tool id="fasta_merge_files_and_filter_unique_sequences" name="FASTA Merge Files and Filter Unique Sequences" version="1.1">
    <description>Concatenate FASTA database files together</description>
    <requirements>
        <requirement type="package" version="2.7.12">python</requirement>
    </requirements>
    <command>
        python '$__tool_directory__/fasta_merge_files_and_filter_unique_sequences.py'
        '$output'
        #for $input in $inputs:
            '$input'
        #end for
    </command>
    <inputs>
        <param name="inputs" format="fasta" multiple="True" type="data" label="Input FASTA files"/>
    </inputs>
    <outputs>
        <data format="fasta" name="output" label="Merged and Filtered FASTA from ${on_string}"/>
    </outputs>
    <tests>
        <test>
          <param name="inputs" value="1.fa,2.fa" ftype="fasta" />
          <output name="output" file="res.fa" ftype="fasta" />
        </test>
    </tests>
    <help>
<![CDATA[
**What it does**

Concatenate FASTA database files together.
Only first appearence of each unique sequence will appear in output.

------

**Citation**

If you use this tool in Galaxy, please the GalaxyP developers at: https://github.com/galaxyproteomics/

]]>
    </help>
</tool>