Mercurial > repos > galaxyp > maxquant
changeset 14:e42225f8a659 draft
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit 9ee3c66acde2e5690b93eca561db78b58df2a07d"
| author | galaxyp |
|---|---|
| date | Thu, 08 Jul 2021 22:45:35 +0000 |
| parents | 181bd6a5f6ce |
| children | 97a7f34fcb6a |
| files | macros.xml maxquant.xml |
| diffstat | 2 files changed, 5 insertions(+), 2 deletions(-) [+] |
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--- a/macros.xml Fri Jun 25 07:18:03 2021 +0000 +++ b/macros.xml Thu Jul 08 22:45:35 2021 +0000 @@ -1,7 +1,7 @@ <?xml version="1.0" ?> <macros> <token name="@VERSION@">1.6.17.0</token> - <token name="@VERSION_SUFFIX@">1</token> + <token name="@VERSION_SUFFIX@">2</token> <token name="@VERSION_PTXQC@">1.0.10</token> <token name="@SUBSTITUTION_RX@">[^\w\-\s\.]</token> <token name="@TMT2PLEX@">
--- a/maxquant.xml Fri Jun 25 07:18:03 2021 +0000 +++ b/maxquant.xml Thu Jul 08 22:45:35 2021 +0000 @@ -32,7 +32,11 @@ #set names_with_ext = [($name if ($name).lower().endswith(str($input_opts.ftype)) else $name + str($input_opts.ftype)) for $name in $names] #for $target, $link in zip($infiles, $names_with_ext) && + #if str($input_opts.ftype) == '.thermo.raw': + cp '$target' '$link' + #else: ln -s '$target' '$link' + #end if #end for && python3 '$__tool_directory__/create_mqpar.py' @@ -454,7 +458,6 @@ <option value="4">Unspecific</option> <option value="5">No digestion</option> </param> - <conditional name="quant_method"> <param name="select_quant_method" type="select" label="Quantitation Methods" help="Select a method if needed.">