Mercurial > repos > galaxyp > mt2mq
comparison READme.md @ 7:f8d02b61e531 draft default tip
"planemo upload commit 657f131e8dd4182938d1b391d10c5ea5c280d5b7"
author | galaxyp |
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date | Wed, 21 Oct 2020 18:09:04 +0000 |
parents | 02fcbaf4cce5 |
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44 - Click the **Operations on multiple datasets** check box at the top of the history panel. | 44 - Click the **Operations on multiple datasets** check box at the top of the history panel. |
45 - Select the files mentioned above. | 45 - Select the files mentioned above. |
46 - Click on ** For all selected** drop down menu and select **Build Dataset list**. | 46 - Click on ** For all selected** drop down menu and select **Build Dataset list**. |
47 - Once the collection is created, rename the dataset collection as `Input collection`. | 47 - Once the collection is created, rename the dataset collection as `Input collection`. |
48 | 48 |
49 2. Download the map_go_uniref50.txt file from [Zenodo](https://doi.org/10.5281/zenodo.4115871). | 49 2. Download the map_go_uniref50.txt file from zenodo. |
50 | 50 |
51 3. Run the **Regroup a HUMAnN2 generated table by features**(Galaxy Version 0.11.1.0) tool is regrouping table features (abundances or coverage) given a table of feature values and a mapping of groups to component features. It produces a new table with group values in place of feature values. | 51 3. Run the **Regroup a HUMAnN2 generated table by features**(Galaxy Version 0.11.1.0) tool is regrouping table features (abundances or coverage) given a table of feature values and a mapping of groups to component features. It produces a new table with group values in place of feature values. |
52 - [**Regroup a HUMAnN2 generated table by features**](https://toolshed.g2.bx.psu.edu/repository?repository_id=85391b8d5d7ad39d) with the following parameters: | 52 - [**Regroup a HUMAnN2 generated table by features**](https://toolshed.g2.bx.psu.edu/repository?repository_id=85391b8d5d7ad39d) with the following parameters: |
53 | 53 |
54 - *"Gene/pathway table"*: `Input collection` | 54 - *"Gene/pathway table"*: `Input collection` |