Mercurial > repos > galaxyp > openms_app

changeset 0:34582591780a draft

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Uploaded
author galaxyp
date Fri, 21 Jun 2013 15:05:37 -0400
parents
children 5a1b16cd7c43
files README.md tool_dependencies.xml
diffstat 2 files changed, 24 insertions(+), 0 deletions(-) [+]
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/README.md	Fri Jun 21 15:05:37 2013 -0400
@@ -0,0 +1,3 @@
+Galaxy tool shed repository for install OpenMs dependency. This
+repository contains no tools, see the OpenMs repository for
+actual Galaxy tools.
\ No newline at end of file
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Fri Jun 21 15:05:37 2013 -0400
@@ -0,0 +1,21 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="OpenMs" version="1.10.0">
+        <install version="1.0">
+            <actions>
+              <action type="download_by_url">http://downloads.sourceforge.net/project/open-ms/OpenMS/OpenMS-1.10.0/OpenMS-1.10.0.tar.gz</action>
+              <action type="move_directory_files">
+                <source_directory>OpenMS-1.10.0</source_directory>
+                <destination_directory>$INSTALL_DIR/</destination_directory>
+              </action>
+              <action type="shell_command">chmod +x $INSTALL_DIR/</action>
+              <action type="set_environment">
+                <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
+              </action>                
+            </actions>
+        </install>
+        <readme>
+          This package downloads and installs OpenMs.
+        </readme>
+    </package>
+</tool_dependency>