Mercurial > repos > galaxyp > openms_featurefindercentroided

comparison FeatureFinderCentroided.xml @ 1:9e6a24fc4f4a draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 820d990f9217706e693b8a2f1da91e13c09cb0fb
author galaxyp
date Tue, 18 Apr 2017 16:03:41 -0400
parents 7dd3b4327a17
children fd386c78f533
comparison
equal deleted inserted replaced
0:7dd3b4327a17 1:9e6a24fc4f4a
53 #end if 53 #end if
54 #if $param_algorithm_feature_min_score: 54 #if $param_algorithm_feature_min_score:
55 -algorithm:feature:min_score $param_algorithm_feature_min_score 55 -algorithm:feature:min_score $param_algorithm_feature_min_score
56 #end if 56 #end if
57 #if $param_algorithm_feature_reported_mz: 57 #if $param_algorithm_feature_reported_mz:
58 -algorithm:feature:reported_mz $param_algorithm_feature_reported_mz 58 -algorithm:feature:reported_mz
59 #if " " in str($param_algorithm_feature_reported_mz):
60 "$param_algorithm_feature_reported_mz"
61 #else
62 $param_algorithm_feature_reported_mz
63 #end if
59 #end if 64 #end if
60 #if $param_algorithm_user_seed_rt_tolerance: 65 #if $param_algorithm_user_seed_rt_tolerance:
61 -algorithm:user-seed:rt_tolerance $param_algorithm_user_seed_rt_tolerance 66 -algorithm:user-seed:rt_tolerance $param_algorithm_user_seed_rt_tolerance
62 #end if 67 #end if
63 #if $param_algorithm_user_seed_mz_tolerance: 68 #if $param_algorithm_user_seed_mz_tolerance:
105 #end if 110 #end if
106 #if $adv_opts.param_algorithm_feature_max_rt_span: 111 #if $adv_opts.param_algorithm_feature_max_rt_span:
107 -algorithm:feature:max_rt_span $adv_opts.param_algorithm_feature_max_rt_span 112 -algorithm:feature:max_rt_span $adv_opts.param_algorithm_feature_max_rt_span
108 #end if 113 #end if
109 #if $adv_opts.param_algorithm_feature_rt_shape: 114 #if $adv_opts.param_algorithm_feature_rt_shape:
110 -algorithm:feature:rt_shape $adv_opts.param_algorithm_feature_rt_shape 115 -algorithm:feature:rt_shape
116 #if " " in str($adv_opts.param_algorithm_feature_rt_shape):
117 "$adv_opts.param_algorithm_feature_rt_shape"
118 #else
119 $adv_opts.param_algorithm_feature_rt_shape
120 #end if
111 #end if 121 #end if
112 #if $adv_opts.param_algorithm_feature_max_intersection: 122 #if $adv_opts.param_algorithm_feature_max_intersection:
113 -algorithm:feature:max_intersection $adv_opts.param_algorithm_feature_max_intersection 123 -algorithm:feature:max_intersection $adv_opts.param_algorithm_feature_max_intersection
114 #end if 124 #end if
115 #end if 125 #end if