diff TextExporter.xml @ 1:d06df685f78c draft

planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 9a14ed1f2d3c9abdfb080251b3419dd9e0c52a14

--- a/TextExporter.xml	Wed Mar 01 12:52:36 2017 -0500
+++ b/TextExporter.xml	Wed Aug 09 09:50:36 2017 -0400
@@ -1,7 +1,7 @@
 <?xml version='1.0' encoding='UTF-8'?>
 <!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTD2Galaxy.-->
 <!--Proposed Tool Section: [File Handling]-->
-<tool id="TextExporter" name="TextExporter" version="2.1.0">
+<tool id="TextExporter" name="TextExporter" version="2.2.0">
   <description>Exports various XML formats to a text file.</description>
   <macros>
     <token name="@EXECUTABLE@">TextExporter</token>
@@ -25,7 +25,12 @@
   -replacement     "$param_replacement"
 #end if
 #if $param_quoting:
-  -quoting $param_quoting
+  -quoting
+  #if " " in str($param_quoting):
+    "$param_quoting"
+  #else
+    $param_quoting
+  #end if
 #end if
 #if $param_no_ids:
   -no_ids
@@ -61,7 +66,12 @@
   -consensus:features $param_consensus_features
 #end if
 #if $param_consensus_sorting_method:
-  -consensus:sorting_method $param_consensus_sorting_method
+  -consensus:sorting_method
+  #if " " in str($param_consensus_sorting_method):
+    "$param_consensus_sorting_method"
+  #else
+    $param_consensus_sorting_method
+  #end if
 #end if
 #if $param_consensus_sort_by_maps:
   -consensus:sort_by_maps
@@ -76,7 +86,7 @@
 #end if
 </command>
   <inputs>
-    <param name="param_in" type="data" format="featurexml,consensusxml,mzml,idxml" optional="False" label="Input file" help="(-in) "/>
+    <param name="param_in" type="data" format="featurexml,consensusxml,idxml,mzml" optional="False" label="Input file" help="(-in) "/>
     <param name="param_separator" type="text" size="30" label="The used separator character(s); if not set the 'tab' character is used" help="(-separator) ">
       <sanitizer>
         <valid initial="string.printable">