diff macros.xml @ 26:3ef5a7dd1a36 draft

planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit 6dcfe37e286523588aa2738599af8d3273290f28-dirty

--- a/macros.xml	Sun Feb 21 11:13:24 2016 -0500
+++ b/macros.xml	Tue May 10 06:33:08 2016 -0400
@@ -26,7 +26,7 @@
             -ri $reverse_ion
     </token>
     <token name="@SEARCHGUI_MAJOR_VERSION@">2</token>
-    <token name="@SEARCHGUI_VERSION@">2.1</token>
+    <token name="@SEARCHGUI_VERSION@">2.8</token>
     <xml name="general_options">
         <param name="precursor_ion_tol_units" type="select" label="Precursor Ion Tolerance Units"
             help="Select based on instrument used, as different machines provide different quality of spectra. ppm is a standard for most precursor ions">
@@ -41,8 +41,10 @@
             help="Which enzyme was used for protein digest in experiment? In most cases, trypsin is used">
             <option value="Trypsin">Trypsin</option>
             <option value="Arg-C">Arg-C</option>
+            <option value="Semi-Arg-C">Semi-Arg-C</option>
             <option value="CNBr">CNBr</option>
             <option value="Chymotrypsin (FYWL)">Chymotrypsin (FYWL)</option>
+            <option value="Semi-Chymotrypsin (FYWL)">Semi-Chymotrypsin (FYWL)</option>
             <option value="Formic Acid">Formic Acid</option>
             <option value="Lys-C">Lys-C</option>
             <option value="Lys-C, no P rule">Lys-C, no P rule</option>