Mercurial > repos > galaxyp > peptideshaker
view macros_basic.xml @ 57:da885ca16cb2 draft
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit 44a20633e04b2396fad4b568904a257769b2bbc1"
author | galaxyp |
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date | Tue, 16 Mar 2021 15:12:03 +0000 |
parents | 1beff3ddce58 |
children | 07ff622ec007 |
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<macros> <xml name="stdio"> <stdio> <exit_code range="1:" level="fatal" description="Job Failed" /> <regex match="OutOfMemoryError" level="fatal_oom" description="Out of memory"/> <regex match="java.*Exception" level="fatal" description="Java Exception"/> <regex match="Could not reserve enough space for * object heap" level="fatal_oom" description="Out of memory"/> <regex match="Could not create the Java virtual machine" level="fatal" description="JVM Error"/> <regex match="PeptideShaker ran out of memory" level="fatal_oom" description="JVM Error"/> <regex match="CompomicsError" level="fatal" description="Compomics Error"/> </stdio> </xml> <token name="@SEARCHGUI_MAJOR_VERSION@">4</token> <token name="@SEARCHGUI_VERSION@">4.0.22</token> <token name="@SEARCHGUI_VERSION_SUFFIX@">0</token> <token name="@PEPTIDESHAKER_VERSION@">2.0.15</token> <token name="@PEPTIDESHAKER_VERSION_SUFFIX@">0</token> <xml name="citations"> <citations> <citation type="doi">10.1186/1471-2105-12-70</citation> <citation type="doi">10.1002/pmic.201000595</citation> <citation type="doi">doi:10.1038/nbt.3109</citation> </citations> </xml> </macros>