Mercurial > repos > galaxyp > proteinpilot
changeset 3:4afba45f01e8
Improved some datatype handling
| author | galaxyp |
|---|---|
| date | Thu, 20 Jun 2013 11:05:37 -0400 |
| parents | ebeaa403d9eb |
| children | c29bb2fabcac |
| files | datatypes_conf.xml galaxyp-toolshed-proteinpilot |
| diffstat | 2 files changed, 9 insertions(+), 1253 deletions(-) [+] |
line wrap: on
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/datatypes_conf.xml Thu Jun 20 11:05:37 2013 -0400 @@ -0,0 +1,9 @@ +<?xml version="1.0"?> +<datatypes> + <datatype_files> + <datatype_file name="proteinpilot.py"/> + </datatype_files> + <registration> + <datatype extension="group" type="galaxy.datatypes.proteinpilot:Group" display_in_upload="true" /> + </registration> +</datatypes>
--- a/galaxyp-toolshed-proteinpilot Thu Jun 20 10:50:41 2013 -0400 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,1253 +0,0 @@ -<!DOCTYPE html> -<html lang="en"> -<head> - <meta http-equiv="X-UA-Compatible" content="IE=edge" /> - <meta charset="utf-8"> - <title> - galaxyp / galaxyp-toolshed-proteinpilot — Bitbucket -</title> - <link rel="icon" type="image/png" href="https://d3oaxc4q5k2d6q.cloudfront.net/m/968d9745b7be/img/favicon.png"> - <meta id="bb-canon-url" name="bb-canon-url" content="https://bitbucket.org"> - - -<link rel="stylesheet" href="https://d3oaxc4q5k2d6q.cloudfront.net/m/968d9745b7be/compressed/css/4c9fb96cff70.css" type="text/css" /> -<link rel="stylesheet" href="https://d3oaxc4q5k2d6q.cloudfront.net/m/968d9745b7be/compressed/css/8cc3605411c7.css" type="text/css" /> - - <!--[if lt IE 9]><link rel="stylesheet" href="https://d3oaxc4q5k2d6q.cloudfront.net/m/968d9745b7be/css/aui/aui-ie.css" media="all"><![endif]--> - <!--[if IE 9]><link rel="stylesheet" href="https://d3oaxc4q5k2d6q.cloudfront.net/m/968d9745b7be/css/aui/aui-ie9.css" media="all"><![endif]--> - 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Versions -differing only after the second decimal should be completely -compatible with each other. Breaking changes should result in an -increment of the number before and/or after the first decimal. All -tools of version less than 1.0.0 should be considered beta.</p> - </article> - - </section> - - - - <section id="repo-activity"> - <h1> - Recent activity - <a href="/galaxyp/galaxyp-toolshed-proteinpilot/rss" class="icon rss">RSS feed fo galaxyp-toolshed-proteinpilot</a> - </h1> - - - - - - - - - -<div class="newsfeed"> - - - - - - - - - - - - <article class="news-item commit"> - <span class="icon commit"></span> - - - - <a href="/galaxyp"><img alt="galaxyp" src="https://secure.gravatar.com/avatar/655358b258b3fbd64aa5c6f42adade4e?d=https%3A%2F%2Fd3oaxc4q5k2d6q.cloudfront.net%2Fm%2F968d9745b7be%2Fimg%2Fdefault_team_avatar%2F32%2Fteam_blue.png&s=32" class="avatar avatar32" /></a> - - - <p> - - - <a href="/galaxyp">galaxyp</a> - - pushed 1 commit to - - -<a href="/galaxyp/galaxyp-toolshed-proteinpilot" title="galaxyp/galaxyp-toolshed-proteinpilot">galaxyp/galaxyp-toolshed-proteinpilot</a> - - - </p> - <time datetime="2013-06-20T14:34:36+00:00">16 minutes ago</time> - - <div class="changeset"> - <a href="/galaxyp/galaxyp-toolshed-proteinpilot/commits/478c9dfebeb1844401c1f5fcf6a55fefa6796655" class="changeset-hash">478c9df</a> - - - - - improved some datatype handling - - - </div> - - - </article> - - - - - - - - - - - - - - - - </article> - - - - - - - <article class="news-item commit"> - <span class="icon commit"></span> - - - - <a href="/jmchilton"><img alt="John Chilton" src="https://secure.gravatar.com/avatar/86cbb595c758989c14ae715c44588998?d=https%3A%2F%2Fd3oaxc4q5k2d6q.cloudfront.net%2Fm%2F968d9745b7be%2Fimg%2Fdefault_avatar%2F32%2Fuser_blue.png&s=32" class="avatar avatar32" /></a> - - - <p> - - - <a href="/jmchilton">John Chilton</a> - - pushed 1 commit to - - -<a href="/galaxyp/galaxyp-toolshed-proteinpilot" title="galaxyp/galaxyp-toolshed-proteinpilot">galaxyp/galaxyp-toolshed-proteinpilot</a> - - - </p> - <time datetime="2013-05-05T19:06:30+00:00">2013-05-05</time> - - <div class="changeset"> - <a href="/galaxyp/galaxyp-toolshed-proteinpilot/commits/eeb0664db8240d23a79fc406b6ae7c39f8159291" class="changeset-hash">eeb0664</a> - - - - - Add TMT options to protein pilot. - - - </div> - - - </article> - - - - - - - - - - - - - - - - - - - <article class="news-item commit"> - <span class="icon commit"></span> - - - - <a href="/jmchilton"><img alt="John Chilton" src="https://secure.gravatar.com/avatar/86cbb595c758989c14ae715c44588998?d=https%3A%2F%2Fd3oaxc4q5k2d6q.cloudfront.net%2Fm%2F968d9745b7be%2Fimg%2Fdefault_avatar%2F32%2Fuser_blue.png&s=32" class="avatar avatar32" /></a> - - - <p> - - - <a href="/jmchilton">John Chilton</a> - - pushed 1 commit to - - -<a href="/galaxyp/galaxyp-toolshed-proteinpilot" title="galaxyp/galaxyp-toolshed-proteinpilot">galaxyp/galaxyp-toolshed-proteinpilot</a> - - - </p> - <time datetime="2013-04-22T15:57:02+00:00">2013-04-22</time> - - <div class="changeset"> - <a href="/galaxyp/galaxyp-toolshed-proteinpilot/commits/3d9ab1d73205383c046a753bf779f707ae616d57" class="changeset-hash">3d9ab1d</a> - - - - - Fix name versus display_name property access. - - - </div> - - - </article> - - - - - - - - - - - - - - - - - - - <article class="news-item commit"> - <span class="icon commit"></span> - - - - <a href="/jmchilton"><img alt="John Chilton" src="https://secure.gravatar.com/avatar/86cbb595c758989c14ae715c44588998?d=https%3A%2F%2Fd3oaxc4q5k2d6q.cloudfront.net%2Fm%2F968d9745b7be%2Fimg%2Fdefault_avatar%2F32%2Fuser_blue.png&s=32" class="avatar avatar32" /></a> - - - <p> - - - <a href="/jmchilton">John Chilton</a> - - pushed 1 commit to - - -<a href="/galaxyp/galaxyp-toolshed-proteinpilot" title="galaxyp/galaxyp-toolshed-proteinpilot">galaxyp/galaxyp-toolshed-proteinpilot</a> - - - </p> - <time datetime="2013-04-16T04:24:45+00:00">2013-04-16</time> - - <div class="changeset"> - <a href="/galaxyp/galaxyp-toolshed-proteinpilot/commits/51a040d6310f38d2fb138acf6fb0a945a4532844" class="changeset-hash">51a040d</a> - - - - - Use config file to store input names and paths. This results in dramatically smaller command-lines (worry we are hitting the upperlimit of what Windows allows). - - - </div> - - - </article> - - - - - - - - - - - - - - - - </article> - - - - - <article class="news-item commit"> - <span class="icon commit"></span> - - - - <a href="/jmchilton"><img alt="John Chilton" src="https://secure.gravatar.com/avatar/86cbb595c758989c14ae715c44588998?d=https%3A%2F%2Fd3oaxc4q5k2d6q.cloudfront.net%2Fm%2F968d9745b7be%2Fimg%2Fdefault_avatar%2F32%2Fuser_blue.png&s=32" class="avatar avatar32" /></a> - - - <p> - Commits by - - <a href="/jmchilton">John Chilton</a> - - were pushed to - - -<a href="/galaxyp/galaxyp-toolshed-proteinpilot" title="galaxyp/galaxyp-toolshed-proteinpilot">galaxyp/galaxyp-toolshed-proteinpilot</a> - - - </p> - <time datetime="2013-02-08T18:44:07+00:00">2013-02-08</time> - <div class="changeset"> - <a href="/galaxyp/galaxyp-toolshed-proteinpilot/commits/83f810baa907de50e87aa2efde99e088" class="changeset-hash">83f810b</a> - - - - Add None as digestion option. - - </div> - - - - - - - - - - - - - <div class="changeset"> - <a href="/galaxyp/galaxyp-toolshed-proteinpilot/commits/d2a889605d117c8bca26124d372841c1" class="changeset-hash">d2a8896</a> - - - - Initial commit. - - </div> - - - - - - - - - - - - - </article> - - - - - - - - <article class="news-item create"> - <span class="icon create"></span> - - - - <a href="/jmchilton"><img alt="John Chilton" src="https://secure.gravatar.com/avatar/86cbb595c758989c14ae715c44588998?d=https%3A%2F%2Fd3oaxc4q5k2d6q.cloudfront.net%2Fm%2F968d9745b7be%2Fimg%2Fdefault_avatar%2F32%2Fuser_blue.png&s=32" class="avatar avatar32" /></a> - - - - <p> - - - <a href="/jmchilton">John Chilton</a> - - created - - -<a href="/galaxyp/galaxyp-toolshed-proteinpilot" title="galaxyp/galaxyp-toolshed-proteinpilot">galaxyp/galaxyp-toolshed-proteinpilot</a> - -</p> - - - <time datetime="2012-08-13T18:27:01+00:00">2012-08-13</time> - - - - - - - - </article> - - - - - -</div> - - - - - - - </section> - </div> - - <div class="column"> - 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