Mercurial > repos > galaxyp > protxml_to_xls

diff protxml_to_xls.xml @ 0:156ef965340e draft default tip

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author galaxyp
date Wed, 08 Oct 2014 13:46:58 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/protxml_to_xls.xml	Wed Oct 08 13:46:58 2014 -0400
@@ -0,0 +1,22 @@
+<tool id="protxml_to_xls" name="Convert ProtXML to Tabular" version="0.1.0">
+  <requirements>
+    <requirement type="package" version="4.6.3">trans_proteomic_pipeline</requirement>
+  </requirements>
+
+  <description></description>
+
+  <command interpreter="python">
+    protxml2html_wrapper.py --input=${input} --export_spreadsheet
+  </command>
+
+  <inputs>
+    <param format="prot.xml" name="input" type="data" label="ProtXML Input"/>
+  </inputs>
+
+  <outputs>
+    <data format="protxml.tsv" name="output" from_work_dir="input.prot.xls" />
+  </outputs>
+
+  <help>
+  </help>
+</tool>