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author galaxyp
date Wed, 08 Oct 2014 13:46:58 -0400
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<tool id="protxml_to_xls" name="Convert ProtXML to Tabular" version="0.1.0">
  <requirements>
    <requirement type="package" version="4.6.3">trans_proteomic_pipeline</requirement>
  </requirements>

  <description></description>

  <command interpreter="python">
    protxml2html_wrapper.py --input=${input} --export_spreadsheet
  </command>

  <inputs>
    <param format="prot.xml" name="input" type="data" label="ProtXML Input"/>
  </inputs>

  <outputs>
    <data format="protxml.tsv" name="output" from_work_dir="input.prot.xls" />
  </outputs>

  <help>
  </help>
</tool>