changeset 8:a9277433c81f draft

planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 42171f39c42277bcfb50271180dcc9c82d3e8e74
author galaxyp
date Mon, 12 Feb 2018 10:48:56 -0500
parents 519778c6020a
children 21be942b0062
files repository_dependencies.xml
diffstat 1 files changed, 127 insertions(+), 127 deletions(-) [+]
line wrap: on
line diff
--- a/repository_dependencies.xml	Thu Jan 11 18:20:31 2018 -0500
+++ b/repository_dependencies.xml	Mon Feb 12 10:48:56 2018 -0500
@@ -1,142 +1,142 @@
 <?xml version="1.0"?>
-<repositories description="OpenMS Suite for LC/MS data management and analyses">  <repository changeset_revision="4d26f6100cae" name="openms_openswathrtnormalizer" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="fefd4af6d4a9" name="openms_decoydatabase" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+<repositories description="OpenMS Suite for LC/MS data management and analyses">  <repository changeset_revision="1ee4ac073c29" name="openms_phosphoscoring" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="2ff5e90e4502" name="openms_featurefindermrm" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="8e9563982784" name="openms_noisefiltergaussian" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="1209627f53d9" name="openms_filefilter" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="4df5a80ef965" name="openms_spectrafilternlargest" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="93eb7f4dbfc8" name="openms_idsplitter" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="1dc75c2bf867" name="openms_isobaricanalyzer" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="25e388f2b21e" name="openms_lowmempeakpickerhires_randomaccess" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="a6ae8429e318" name="openms_mrmmapper" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="e450feb60917" name="openms_decharger" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="711e8a2cd561" name="openms_semanticvalidator" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="02ebdc19b376" name="openms_spectrafilterwindowmower" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="a63127a614dc" name="openms_ptpredict" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="3bab3e453b15" name="openms_featurefinderidentification" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="a62e8d76a463" name="openms_simplesearchengine" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="76c83a737f67" name="openms_spectrafilterparentpeakmower" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="7a16cf008b2b" name="openms_fuzzydiff" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="05f78b9d5874" name="openms_metaprosip" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="67d6729ce69b" name="openms_featurefindersuperhirn" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="bb096b4a09ee" name="openms_rnpxl" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="2d60de41a5a0" name="openms_mascotadapter" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="a2dc429d27cf" name="openms_openswathchromatogramextractor" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="01692466558f" name="openms_openswathassaygenerator" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="c8bb9ba168ca" name="openms_topperc" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="4d26f6100cae" name="openms_openswathrtnormalizer" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="25d536a2b60f" name="openms_baselinefilter" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="e6e307b69edc" name="openms_featurefindercentroided" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="a64168d9552c" name="openms_qcembedder" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="4c250c7ce749" name="openms_qcshrinker" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="755f80e5c2b9" name="openms_mztabexporter" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="8131d9872095" name="openms_proteininference" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="b89304327555" name="openms_proteinresolver" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="083ddfc32421" name="openms_idripper" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="e466b8e25764" name="openms_openswathmzmlfilecacher" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="40ca4302e603" name="openms_mapalignerposeclustering" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="4620ef722e65" name="openms_labeledeval" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="88195f5375d4" name="openms_spectrafilterscaler" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="7563bb117baa" name="openms_spectrafilterbernnorm" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="c8b225c69a7f" name="openms_xtandemadapter" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="d505219f3f15" name="openms_masscalculator" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="3a462c96f2bd" name="openms_featurefindermultiplex" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="493619f4fb3b" name="openms_mapstatistics" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
   <repository changeset_revision="89fbbb7eff4f" name="openms_metabolitespectralmatcher" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="083ddfc32421" name="openms_idripper" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="6ec3e2d39fc7" name="openms_inspectadapter" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="4bd01f5710e1" name="openms_featurelinkerlabeled" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="707b0a22c35c" name="openms_iddecoyprobability" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="d92d43ce63ce" name="openms_idmapper" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="51a9d7ae037a" name="openms_ffeval" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="846cba1db7f9" name="openms_idconflictresolver" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="382cde407f81" name="openms_idfilter" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="553b9cc3a1b2" name="openms_featurelinkerunlabeled" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="8e394b52e139" name="openms_highresprecursormasscorrector" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="d44d2a81db16" name="openms_qcmerger" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="0b5cc1092312" name="openms_transformationevaluation" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="7c5e7e6eff99" name="openms_ticcalculator" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
   <repository changeset_revision="890025d6e426" name="openms_fidoadapter" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="8a98c213ef47" name="openms_mapnormalizer" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="bf615149e9dd" name="openms_featurefinderisotopewavelet" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="8438e17c086c" name="openms_compnovo" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="2af6336ee83a" name="openms_openswathfeaturexmltotsv" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="08d69e97ad33" name="openms_consensusmapnormalizer" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="a63127a614dc" name="openms_ptpredict" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="b544c16f4d53" name="openms_precursorionselector" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="2c2a25363b76" name="openms_eicextractor" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="73eb741b9c33" name="openms_sequencecoveragecalculator" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="3313b24adee6" name="openms_textexporter" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="9127ab1bdbc5" name="openms_openswathfilesplitter" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="88841fa6a769" name="openms_cvinspector" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="fefd4af6d4a9" name="openms_decoydatabase" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="b45401130ea3" name="openms_openswathrewritetofeaturexml" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
   <repository changeset_revision="e8f6b4cfe829" name="openms_featurefindermetabo" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="3e147f112bac" name="openms_peakpickerhires" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="a71a601466b3" name="openms_noisefiltersgolay" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="fad4e93d79ee" name="openms_rtevaluation" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="1dc75c2bf867" name="openms_isobaricanalyzer" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="01692466558f" name="openms_openswathassaygenerator" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="67d6729ce69b" name="openms_featurefindersuperhirn" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="d21ae981ab53" name="openms_mrmtransitiongrouppicker" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="b544c16f4d53" name="openms_precursorionselector" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="e301986c34e2" name="openms_erpairfinder" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
   <repository changeset_revision="f7fef900f5b2" name="openms_falsediscoveryrate" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="8e9563982784" name="openms_noisefiltergaussian" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="27cba4c5fc42" name="openms_filemerger" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="27d465eba757" name="openms_maprttransformer" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="2c2a25363b76" name="openms_eicextractor" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="5f414e1b5b9d" name="openms_idrtcalibration" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="91454515b5d6" name="openms_openswathconfidencescoring" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="b97fe2b25b08" name="openms_featurelinkerunlabeledkd" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="e8e0eb627013" name="openms_dtaextractor" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="62cf95f74d84" name="openms_peakpickeriterative" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="08d69e97ad33" name="openms_consensusmapnormalizer" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="1734e2933b2b" name="openms_openswathworkflow" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
   <repository changeset_revision="fa02594ff0f2" name="openms_idmassaccuracy" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="252ef1ffd08d" name="openms_accuratemasssearch" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="2ff5e90e4502" name="openms_featurefindermrm" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="0dc8b2e9867f" name="openms_peakpickerwavelet" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="0115dc632d96" name="openms_spectrafilternormalizer" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="f7912ee5960f" name="openms_mascotadapteronline" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="9b8c0111c272" name="openms_tofcalibration" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="a71a601466b3" name="openms_noisefiltersgolay" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="e039cc5c7aed" name="openms_peptideindexer" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
   <repository changeset_revision="79197a523dd0" name="openms_featurelinkerunlabeledqt" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="91454515b5d6" name="openms_openswathconfidencescoring" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="e64a9dc50d1c" name="openms_idfileconverter" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="4ebb2efad089" name="openms_spectrastsearchadapter" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="51a9d7ae037a" name="openms_ffeval" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="27d465eba757" name="openms_maprttransformer" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="edf5750e787c" name="openms_svmtheoreticalspectrumgeneratortrainer" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="027e52d0ddd6" name="openms_proteinquantifier" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="cc8e8639fc76" name="openms_openswathdiaprescoring" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="889e1786a739" name="openms_qcimporter" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="92e578af6d7e" name="openms_demeanderize" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="a407b6790342" name="openms_msgfplusadapter" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="4e77b8f12cd3" name="openms_consensusid" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="fad4e93d79ee" name="openms_rtevaluation" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="a42034047640" name="openms_multiplexresolver" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="0480462adc36" name="openms_mssimulator" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="a03574ef80f7" name="openms_luciphoradapter" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="406855426f41" name="openms_fileconverter" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="16bf70f8160c" name="openms_xmlvalidator" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
   <repository changeset_revision="476b5e296979" name="openms_idscoreswitcher" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="05a4c9988a6e" name="openms_inclusionexclusionlistcreator" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="54a0c2f51130" name="openms_qccalculator" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="0dc8b2e9867f" name="openms_peakpickerwavelet" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="44496d393a9f" name="openms_spectrafilterthresholdmower" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="5ad830edc021" name="openms_fileinfo" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="7f545d44a4d9" name="openms_masstraceextractor" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
   <repository changeset_revision="19c566c5568b" name="openms_qcexporter" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="44496d393a9f" name="openms_spectrafilterthresholdmower" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="72df30a46b5b" name="openms_spectrafiltersqrtmower" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="e6e307b69edc" name="openms_featurefindercentroided" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="76c83a737f67" name="openms_spectrafilterparentpeakmower" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="0115dc632d96" name="openms_spectrafilternormalizer" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="9b8c0111c272" name="openms_tofcalibration" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="4df5a80ef965" name="openms_spectrafilternlargest" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="382cde407f81" name="openms_idfilter" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="d92d43ce63ce" name="openms_idmapper" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="c8b225c69a7f" name="openms_xtandemadapter" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="d44d2a81db16" name="openms_qcmerger" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="b90174637963" name="openms_rtmodel" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="16bf70f8160c" name="openms_xmlvalidator" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="1ee4ac073c29" name="openms_phosphoscoring" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="bd49f7d37e2f" name="openms_rnpxlxicfilter" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="cdf5f9b5fcb6" name="openms_ptmodel" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="4ebb2efad089" name="openms_spectrastsearchadapter" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="e64a9dc50d1c" name="openms_idfileconverter" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="24d549b5f7fe" name="openms_openswathdecoygenerator" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="401716f36b83" name="openms_speclibcreator" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="cf3203fe29b3" name="openms_openswathanalyzer" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="8a98c213ef47" name="openms_mapnormalizer" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="7328fe9298e8" name="openms_additiveseries" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="54a0c2f51130" name="openms_qccalculator" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="6de62e51a218" name="openms_internalcalibration" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="27cba4c5fc42" name="openms_filemerger" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="0b1a794f0269" name="openms_idextractor" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="9b0d7aae8094" name="openms_compnovocid" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="1c5f31b8d632" name="openms_idmerger" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="bf615149e9dd" name="openms_featurefinderisotopewavelet" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="d28edb2dbb7a" name="openms_databasefilter" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="bde2a6c16d46" name="openms_rtpredict" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="af0757e3c401" name="openms_spectramerger" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="3e147f112bac" name="openms_peakpickerhires" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="90d01cd5f173" name="openms_spectrafiltermarkermower" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
   <repository changeset_revision="94dce068fb3e" name="openms_digestor" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="1c5f31b8d632" name="openms_idmerger" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="2d60de41a5a0" name="openms_mascotadapter" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="edf5750e787c" name="openms_svmtheoreticalspectrumgeneratortrainer" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="88841fa6a769" name="openms_cvinspector" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="585584d29e7b" name="openms_mrmpairfinder" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="401716f36b83" name="openms_speclibcreator" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="493619f4fb3b" name="openms_mapstatistics" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="6de62e51a218" name="openms_internalcalibration" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="9cc306487be8" name="openms_featurefindermultiplex" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="b89304327555" name="openms_proteinresolver" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="d28edb2dbb7a" name="openms_databasefilter" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="d21ae981ab53" name="openms_mrmtransitiongrouppicker" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="9127ab1bdbc5" name="openms_openswathfilesplitter" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="5f414e1b5b9d" name="openms_idrtcalibration" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="14a0112f0705" name="openms_rnpxlsearch" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="05a4c9988a6e" name="openms_inclusionexclusionlistcreator" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
   <repository changeset_revision="9c4ff86cdbe9" name="openms_mzmlsplitter" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="05f78b9d5874" name="openms_metaprosip" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="7a16cf008b2b" name="openms_fuzzydiff" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="4e77b8f12cd3" name="openms_consensusid" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="a62e8d76a463" name="openms_simplesearchengine" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="a03574ef80f7" name="openms_luciphoradapter" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="7563bb117baa" name="openms_spectrafilterbernnorm" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="e450feb60917" name="openms_decharger" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="25e388f2b21e" name="openms_lowmempeakpickerhires_randomaccess" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="73eb741b9c33" name="openms_sequencecoveragecalculator" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="bb096b4a09ee" name="openms_rnpxl" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="b97fe2b25b08" name="openms_featurelinkerunlabeledkd" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="af0757e3c401" name="openms_spectramerger" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="a2dc429d27cf" name="openms_openswathchromatogramextractor" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="14a0112f0705" name="openms_rnpxlsearch" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="88195f5375d4" name="openms_spectrafilterscaler" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="bd49f7d37e2f" name="openms_rnpxlxicfilter" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="3ff5d7015bc7" name="openms_qcextractor" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
   <repository changeset_revision="53a5a8461c4a" name="openms_digestormotif" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="c69f69d7867a" name="openms_idposteriorerrorprobability" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="9b0d7aae8094" name="openms_compnovocid" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="24d549b5f7fe" name="openms_openswathdecoygenerator" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="4bd01f5710e1" name="openms_featurelinkerlabeled" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="027e52d0ddd6" name="openms_proteinquantifier" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="711e8a2cd561" name="openms_semanticvalidator" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="8438e17c086c" name="openms_compnovo" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="6ec3e2d39fc7" name="openms_inspectadapter" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
   <repository changeset_revision="571567da90a8" name="openms_externalcalibration" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="8131d9872095" name="openms_proteininference" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="406855426f41" name="openms_fileconverter" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="90d01cd5f173" name="openms_spectrafiltermarkermower" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="846cba1db7f9" name="openms_idconflictresolver" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="0b5cc1092312" name="openms_transformationevaluation" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="e039cc5c7aed" name="openms_peptideindexer" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="3ff5d7015bc7" name="openms_qcextractor" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="72df30a46b5b" name="openms_spectrafiltersqrtmower" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="252ef1ffd08d" name="openms_accuratemasssearch" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="cdf5f9b5fcb6" name="openms_ptmodel" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="c69f69d7867a" name="openms_idposteriorerrorprobability" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="2af6336ee83a" name="openms_openswathfeaturexmltotsv" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="6417075d710f" name="openms_lowmempeakpickerhires" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="ec59104292a0" name="openms_precursormasscorrector" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="b90174637963" name="openms_rtmodel" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
   <repository changeset_revision="a1c8f2b9305c" name="openms_targetedfileconverter" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="70f729e59244" name="openms_mapalignerposeclustering" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="a42034047640" name="openms_multiplexresolver" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="7328fe9298e8" name="openms_additiveseries" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="707b0a22c35c" name="openms_iddecoyprobability" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="755f80e5c2b9" name="openms_mztabexporter" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="e466b8e25764" name="openms_openswathmzmlfilecacher" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="7c5e7e6eff99" name="openms_ticcalculator" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="4620ef722e65" name="openms_labeledeval" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="ec59104292a0" name="openms_precursormasscorrector" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="62cf95f74d84" name="openms_peakpickeriterative" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="3313b24adee6" name="openms_textexporter" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="a64168d9552c" name="openms_qcembedder" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="a407b6790342" name="openms_msgfplusadapter" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="02ebdc19b376" name="openms_spectrafilterwindowmower" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="1734e2933b2b" name="openms_openswathworkflow" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="1209627f53d9" name="openms_filefilter" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="4c250c7ce749" name="openms_qcshrinker" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="8e394b52e139" name="openms_highresprecursormasscorrector" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="6417075d710f" name="openms_lowmempeakpickerhires" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="f7912ee5960f" name="openms_mascotadapteronline" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="3bab3e453b15" name="openms_featurefinderidentification" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="92e578af6d7e" name="openms_demeanderize" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="bde2a6c16d46" name="openms_rtpredict" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="b45401130ea3" name="openms_openswathrewritetofeaturexml" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="e301986c34e2" name="openms_erpairfinder" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="7f545d44a4d9" name="openms_masstraceextractor" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="cf3203fe29b3" name="openms_openswathanalyzer" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="553b9cc3a1b2" name="openms_featurelinkerunlabeled" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="0b1a794f0269" name="openms_idextractor" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="93eb7f4dbfc8" name="openms_idsplitter" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="cc8e8639fc76" name="openms_openswathdiaprescoring" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="0480462adc36" name="openms_mssimulator" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="e8e0eb627013" name="openms_dtaextractor" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="889e1786a739" name="openms_qcimporter" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="a6ae8429e318" name="openms_mrmmapper" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="d505219f3f15" name="openms_masscalculator" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="5ad830edc021" name="openms_fileinfo" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="c8bb9ba168ca" name="openms_topperc" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
-  <repository changeset_revision="25d536a2b60f" name="openms_baselinefilter" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
+  <repository changeset_revision="585584d29e7b" name="openms_mrmpairfinder" owner="galaxyp" toolshed="https://toolshed.g2.bx.psu.edu" />
 </repositories>