Mercurial > repos > galaxyp > unipept
diff unipept.py @ 8:7863f1abcdda draft
planemo upload for repository https://unipept.ugent.be/apidocs commit 8b14b02c5b11232c0c2cc278e3ac492455f2e0a5
| author | galaxyp |
|---|---|
| date | Sat, 02 Jul 2022 13:46:38 +0000 |
| parents | 75b3b3d0adbf |
| children |
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--- a/unipept.py Tue Apr 06 16:13:57 2021 +0000 +++ b/unipept.py Sat Jul 02 13:46:38 2022 +0000 @@ -486,7 +486,7 @@ parser.add_option('-T', '--tsv', dest='tsv', default=None, help='Output file path for TAB-separated-values (.tsv) formatted results') parser.add_option('-C', '--csv', dest='csv', default=None, help='Output file path for Comma-separated-values (.csv) formatted results') parser.add_option('-U', '--unmatched', dest='unmatched', default=None, help='Output file path for peptide with no matches') - parser.add_option('-u', '--url', dest='url', default='http://api.unipept.ugent.be/api/v1/', help='unipept url http://api.unipept.ugent.be/api/v1/') + parser.add_option('-u', '--url', dest='url', default='https://api.unipept.ugent.be/api/v1/', help='unipept url https://api.unipept.ugent.be/api/v1/') parser.add_option('-P', '--peptide_match', dest='peptide_match', choices=['best', 'full', 'report'], default='best', help='Match whole peptide') parser.add_option('--unmatched_aa', dest='unmatched_aa', default=None, help='Show unmatched AA in peptide as') # debug