Mercurial > repos > geco-team > gmql_queries_composer
view gmql_operators_map.xml @ 0:a80c93182db3 draft default tip
planemo upload for repository https://github.com/lu-brn/gmql-galaxy commit 953ee36ceda5814dc9baa03427bc0eb4ee2e93bd-dirty
author | geco-team |
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date | Tue, 26 Jun 2018 09:08:06 -0400 |
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<macros> <import>gmql_queries_macros.xml</import> <xml name="map"> <expand macro="input_var" name="input_var_reference" label="Reference Dataset" optional="false" /> <expand macro="input_var" name="input_var_experiment" label="Experiment Dataset" optional="false" /> <expand macro="output_var" /> <param name="count_result" type="text" label="Rename default counting attribute name" help="The MAP operation always counts the number of each experiment sample region intersecting a certain reference region; Results are stored by default in an attribute named count_[DSrefName]_[DSexpName]." optional="true"> <expand macro="text_val" /> </param> <section name="new_regions_attributes" title="New Genomic Region Attributes" expanded="false"> <repeat name="new_regions" title="Add New Region Attribute to Result Dataset" min="0" default="0" help="Create new genomic region attributes by using functions on existing experiment region attributes"> <param name="new_name" type="text" label="New Region Attribute Name" optional="true"> <expand macro="text_val"/> </param> <expand macro="aggrFuncs" help="Sum, average, maximum, minimum and standard deviation are only for numerical attributes" optional="true" label="Aggregate Function to apply"/> <param name="argument" label="Region attributes over which apply function" type="text" optional="true"> <expand macro="text_val"/> </param> </repeat> </section> <section name="joinby" title="Condition on Samples Metadata" expanded="false" help="A list of metadata attribute names (or their suffixes) that must be present with equal values in the metadata of the reference and experiment samples."> <repeat name="joinby_clause" title="Attributes to match" min="0" default="0" > <expand macro="metajoin_attribute" name="j_att" optional="true" > <expand macro="metajoin_options" /> </expand> </repeat> </section> <expand macro="materialize_stm" /> </xml> </macros>