Mercurial > repos > geco-team > gmql_queries_editor
diff test-data/TG/S_00001.gdm.meta @ 0:c74a1c7121ec draft default tip
planemo upload for repository https://github.com/lu-brn/gmql-galaxy commit 953ee36ceda5814dc9baa03427bc0eb4ee2e93bd-dirty
author | geco-team |
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date | Tue, 26 Jun 2018 08:59:49 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/TG/S_00001.gdm.meta Tue Jun 26 08:59:49 2018 -0400 @@ -0,0 +1,93 @@ +ID 1891 +antibody CTCF +antibody_antibodyDescription Rabbit polyclonal. Antibody Target: CTCF +antibody_lab Myers, Hardison, Snyder +antibody_label CTCF (07-729) +antibody_lots 1350637 DAM1472197 +antibody_orderUrl http://www.millipore.com/catalogue/item/07-729 +antibody_tag CTCF +antibody_target CTCF +antibody_targetClass TFSS +antibody_targetDescription CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances. +antibody_targetId GeneCard:CTCF +antibody_targetUrl http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTCF +antibody_type Antibody +antibody_validation Human_-_CTCF_(07-729)(Western_blot,Motif_Enrichment):human_CTCF_validation_Myers.pdf Human_-_CTCF_(07-729)(Western_blot):human_CTCF_07-729_validation_Snyder.pdf Mouse_-_CTCF(Western_blot):mouse_CTCF_validation_Hardison.pdf +antibody_vendorId 07-729 +antibody_vendorName Millipore +avg_score 7.5 +cell AG04450 +cell_description fetal lung fibroblast +cell_karyotype normal +cell_lineage endoderm +cell_orderUrl http://ccr.coriell.org/Sections/Search/Sample_Detail.aspx?Ref=AG04450 +cell_organism human +cell_protocol Stam:AG04450_Stam_protocol.pdf +cell_sex Male +cell_tag AG04450 +cell_termId BTO:0000763 +cell_termUrl http://www.ebi.ac.uk/ontology-lookup/browse.do?ontName=BTO&termId=BTO%3A0000763 +cell_tier 2 +cell_tissue lung +cell_type Cell Line +cell_vendorId AG04450 +cell_vendorName Coriell +composite wgEncodeUwTfbs +control std +controlId wgEncodeEH000930 +control_description Standard input signal for most experiments. +control_label Standard Control +control_tag STD +control_type control +dataType ChipSeq +dataType_dataGroup TFBS & Histones +dataType_description Chromatin IP Sequencing +dataType_label ChIP-seq +dataType_tag CHIPSEQ +dataType_type dataType +dataVersion ENCODE Jan 2011 Freeze +dateSubmitted 2010-10-23 +dateUnrestricted 2011-07-23 +dccAccession wgEncodeEH000976 +geoSampleAccession GSM749769 +grant Stam +grant_description Stamatoyannopoulous +grant_grantInst University of Washington +grant_label Stamatoyannopoulous +grant_projectName UW +grant_tag STAM +grant_type grant +lab UW +labExpId DS16029 +labVersion lmax-v1.0 +lab_description Stamatoyannopoulous - University of Washington +lab_grantPi Stam +lab_labInst University of Washington +lab_labPi Stam +lab_labPiFull John Stamatoyannopoulous +lab_label Stamatoyannopoulous - UW +lab_organism human +lab_tag UW +lab_type lab +md5sum 3c6b5bf3eefc28b6bab4ef37916011a1 +origAssembly hg19 +patient_age 63 +project wgEncode +replicate 1 +setType exp +sex Male +size 776K +subId 2663 +tableName wgEncodeUwTfbsAg04450CtcfStdPkRep1 +treatment None +treatment_description No special treatment or protocol applies +treatment_label No treatment or prot +treatment_tag NONE +treatment_type control +type narrowPeak +url http://hgdownload.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwTfbs/wgEncodeUwTfbsAg04450CtcfStdPkRep1.narrowPeak.gz +view Peaks +view_description Regions of enriched signal in experiment +view_label Peaks +view_tag PKS +view_type view