Mercurial > repos > geco-team > gmql_queries_editor
view test-data/TG/S_00001.gdm.meta @ 0:c74a1c7121ec draft default tip
planemo upload for repository https://github.com/lu-brn/gmql-galaxy commit 953ee36ceda5814dc9baa03427bc0eb4ee2e93bd-dirty
| author | geco-team |
|---|---|
| date | Tue, 26 Jun 2018 08:59:49 -0400 |
| parents | |
| children |
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ID 1891 antibody CTCF antibody_antibodyDescription Rabbit polyclonal. Antibody Target: CTCF antibody_lab Myers, Hardison, Snyder antibody_label CTCF (07-729) antibody_lots 1350637 DAM1472197 antibody_orderUrl http://www.millipore.com/catalogue/item/07-729 antibody_tag CTCF antibody_target CTCF antibody_targetClass TFSS antibody_targetDescription CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances. antibody_targetId GeneCard:CTCF antibody_targetUrl http://www.genecards.org/cgi-bin/carddisp.pl?gene=CTCF antibody_type Antibody antibody_validation Human_-_CTCF_(07-729)(Western_blot,Motif_Enrichment):human_CTCF_validation_Myers.pdf Human_-_CTCF_(07-729)(Western_blot):human_CTCF_07-729_validation_Snyder.pdf Mouse_-_CTCF(Western_blot):mouse_CTCF_validation_Hardison.pdf antibody_vendorId 07-729 antibody_vendorName Millipore avg_score 7.5 cell AG04450 cell_description fetal lung fibroblast cell_karyotype normal cell_lineage endoderm cell_orderUrl http://ccr.coriell.org/Sections/Search/Sample_Detail.aspx?Ref=AG04450 cell_organism human cell_protocol Stam:AG04450_Stam_protocol.pdf cell_sex Male cell_tag AG04450 cell_termId BTO:0000763 cell_termUrl http://www.ebi.ac.uk/ontology-lookup/browse.do?ontName=BTO&termId=BTO%3A0000763 cell_tier 2 cell_tissue lung cell_type Cell Line cell_vendorId AG04450 cell_vendorName Coriell composite wgEncodeUwTfbs control std controlId wgEncodeEH000930 control_description Standard input signal for most experiments. control_label Standard Control control_tag STD control_type control dataType ChipSeq dataType_dataGroup TFBS & Histones dataType_description Chromatin IP Sequencing dataType_label ChIP-seq dataType_tag CHIPSEQ dataType_type dataType dataVersion ENCODE Jan 2011 Freeze dateSubmitted 2010-10-23 dateUnrestricted 2011-07-23 dccAccession wgEncodeEH000976 geoSampleAccession GSM749769 grant Stam grant_description Stamatoyannopoulous grant_grantInst University of Washington grant_label Stamatoyannopoulous grant_projectName UW grant_tag STAM grant_type grant lab UW labExpId DS16029 labVersion lmax-v1.0 lab_description Stamatoyannopoulous - University of Washington lab_grantPi Stam lab_labInst University of Washington lab_labPi Stam lab_labPiFull John Stamatoyannopoulous lab_label Stamatoyannopoulous - UW lab_organism human lab_tag UW lab_type lab md5sum 3c6b5bf3eefc28b6bab4ef37916011a1 origAssembly hg19 patient_age 63 project wgEncode replicate 1 setType exp sex Male size 776K subId 2663 tableName wgEncodeUwTfbsAg04450CtcfStdPkRep1 treatment None treatment_description No special treatment or protocol applies treatment_label No treatment or prot treatment_tag NONE treatment_type control type narrowPeak url http://hgdownload.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwTfbs/wgEncodeUwTfbsAg04450CtcfStdPkRep1.narrowPeak.gz view Peaks view_description Regions of enriched signal in experiment view_label Peaks view_tag PKS view_type view