Mercurial > repos > geert-vandeweyer > coverage_report

diff CoverageReport.xml @ 19:6c7b09220992 draft

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new version 0.0.3 (fix on headless R)
author geert-vandeweyer
date Thu, 06 Nov 2014 03:35:57 -0500
parents 43427b07e6bb
children b8e4ed167120
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--- a/CoverageReport.xml	Wed Jun 18 08:18:10 2014 -0400
+++ b/CoverageReport.xml	Thu Nov 06 03:35:57 2014 -0500
@@ -1,4 +1,4 @@
-<tool id="CoverageReport2" name="Panel Coverage Report" version="0.0.2">
+<tool id="CoverageReport2" name="Panel Coverage Report" version="0.0.3">
   <description></description>
   
   <command interpreter="perl">
@@ -81,7 +81,7 @@
   Column 1: Chromosome : Use the same syntax as the references used by Galaxy. Check your sam-headers for the correct format. ('chr1' vs '1')
   Column 2: Start Position
   Column 3: End Position
-  Column 4: Target Name. Use : "GENE-NAME&lt;space&gt;Exon_number" : This is split on the space after 'GeneName' for correct grouping.
+  Column 4: Target Name. Use : "GENE-NAME|Exon_number" : This is split on the pipe (or space) after 'GeneName' for correct grouping.Example: "CLIP2|Exon_4"
   Column 5: Score : ignored, use '0'
   Column 6: Strand: ignored,'+' or '-'