0
|
1 <?xml version="1.0"?>
|
|
2 <tool_dependency>
|
|
3 <package name="twoBitToFa" version="latest">
|
|
4 <install version="1.0">
|
|
5 <actions_group>
|
|
6
|
|
7 <actions os="linux" architecture="x86_64">
|
|
8 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/twoBitToFa</action>
|
|
9 <action type="shell_command">chmod ugo+x *</action>
|
|
10 <action type="move_directory_files">
|
|
11 <source_directory>.</source_directory>
|
|
12 <destination_directory>$INSTALL_DIR/bin</destination_directory>
|
|
13 </action>
|
|
14 </actions>
|
|
15
|
|
16 <actions os="darwin" architecture="x86_64">
|
|
17 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/twoBitToFa</action>
|
|
18 <action type="shell_command">chmod ugo+x *</action>
|
|
19 <action type="move_directory_files">
|
|
20 <source_directory>.</source_directory>
|
|
21 <destination_directory>$INSTALL_DIR/bin</destination_directory>
|
|
22 </action>
|
|
23 </actions>
|
|
24
|
|
25 <action type="set_environment">
|
|
26 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
|
|
27 </action>
|
|
28 </actions_group>
|
|
29 </install>
|
|
30 <readme>
|
|
31 Downloads and installs the latest toBitToFa from the UCSC.
|
|
32 It will try to install executable files from: UCSC ftp://hgdownload.cse.ucsc.edu/admin/exe/
|
|
33 ( The website doesn't offer previously released versions. )
|
|
34
|
|
35 </readme>
|
|
36 </package>
|
|
37
|
|
38 </tool_dependency>
|