view miranda2asko.xml @ 0:3f6cdc878f35 draft

planemo upload for repository https://github.com/genouest/galaxy-tools/tree/master/tools/miranda2asko commit bd6737d0fba64ed6e7d3be5267868942674696ea

<tool id="miranda2asko" name="Convert miRanda output to tabular" version="0.1">
    <description>for AskOmics</description>
    <requirements>
        <requirement type="package" version="5.22.2.1">perl</requirement>
    </requirements>

    <command detect_errors="exit_code"><![CDATA[
        perl '$__tool_directory__/miranda2asko.pl' '${miranda}' > '${mirasko}'
    ]]></command>

    <inputs>
        <param format="tsv" name="miranda" type="data" label="miRanda output" />
    </inputs>

    <outputs>
        <data format="tsv" name="mirasko" label="${tool.name} on ${on_string} : AskOmics miRanda output" />
    </outputs>

    <tests>
        <test>
            <param name="miranda" ftype="tsv" value="miranda.out" />
            <output name="mirasko" ftype="tsv" file="miranda.asko.out" compare="sim_size" />
        </test>
    </tests>

    <help>
        Generates a TSV compliant to AskOmics from the miRanda output.
    </help>

    <citations>
    </citations>
</tool>