Mercurial > repos > george-weingart > maaslin
annotate MaAsLin_galaxy_ReadMe.txt @ 0:e0b5980139d9
maaslin
| author | george-weingart |
|---|---|
| date | Tue, 13 May 2014 22:00:40 -0400 |
| parents | |
| children |
| rev | line source |
|---|---|
| 0 | 1 Installation instructions for maaslin in a galaxy environment. |
| 2 These instructions require the Mercurial versioning system, galaxy, and an internet connection. | |
| 3 | |
| 4 1. In the "galaxy-dist/tools" directory install maaslin by typing in a terminal: | |
| 5 hg clone https://bitbucket.org/biobakery/maaslin | |
| 6 | |
| 7 2. Update member tool_conf.xml in the galaxy directory adding the following: | |
| 8 <section name="maaslin" id="maaslin"> | |
| 9 <tool file="maaslin/galaxy/maaslin.xml"/> | |
| 10 </section> | |
| 11 | |
| 12 3. Update member datatypes_conf.xml in the galaxy directory adding the following: | |
| 13 <datatype extension="maaslin" type="galaxy.datatypes.data:Text" subclass="true" display_in_upload="true"/> | |
| 14 | |
| 15 4. Recycle galaxy | |
| 16 |