Mercurial > repos > gga > chado_organism_delete_organisms

view organism_delete_organism.xml @ 0:29ac3aedc97d draft

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planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/chado commit 81a83f06b49db32928ba0cd44e5b6d0431868d27
author gga
date Thu, 21 Jun 2018 08:42:24 -0400
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children 81c189dd9a10
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<?xml version="1.0"?>
<tool id="organism_delete_organisms" name="Chado organism delete" version="@WRAPPER_VERSION@.0">
 <description>delete_organisms</description>
	<macros>
		<import>macros.xml</import>
	</macros>
	<expand macro="requirements"/>
    <code file="chado.py"/>
	<command detect_errors="aggressive"><![CDATA[
@AUTH@

chakin organism delete_organisms

--organism_id $organism

 > $results
    ]]></command>
	<inputs>
    <!-- arguments -->

    <!-- options -->
    <param argument="--organism"
           type="select"
           dynamic_options="list_organisms()"
           label="Organism" />

	</inputs>
	<outputs>
		<data format="txt" name="results"/>
	</outputs>
	<help>
Delete all organisms

@HELP@
	</help>
</tool>