Mercurial > repos > gga > chado_organism_delete_organisms

view organism_delete_organism.xml @ 7:81c189dd9a10 draft

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planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/chado commit f5c5d81fc9781371e12b91c0d609b9201587cda5
author gga
date Fri, 23 Nov 2018 10:59:18 -0500
parents 29ac3aedc97d
children b48b76dc2695
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<?xml version="1.0"?>
<tool id="organism_delete_organisms" name="Chado organism delete" version="@WRAPPER_VERSION@.0">
    <description>delete_organisms</description>
	<macros>
		<import>macros.xml</import>
	</macros>
	<expand macro="requirements"/>
    <code file="chado.py"/>
	<command detect_errors="aggressive"><![CDATA[
@AUTH@

chakin organism delete_organisms

--organism_id $organism

 > $results
    ]]></command>
	<inputs>
    <!-- arguments -->

    <!-- options -->
    <param argument="--organism"
           type="select"
           dynamic_options="list_organisms()"
           label="Organism" />

	</inputs>
	<outputs>
		<data format="txt" name="results"/>
	</outputs>
	<help>
Delete all organisms

@HELP@
	</help>
</tool>