Mercurial > repos > gga > chado_organism_get_organisms
comparison organism_get_organisms.xml @ 7:05e1fd17832b draft
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/chado commit f5c5d81fc9781371e12b91c0d609b9201587cda5
| author | gga |
|---|---|
| date | Fri, 23 Nov 2018 11:14:04 -0500 |
| parents | 1ce80eabf7eb |
| children | a3e4a405189e |
comparison
equal
deleted
inserted
replaced
| 6:8fbc70518b2b | 7:05e1fd17832b |
|---|---|
| 1 <?xml version="1.0"?> | 1 <?xml version="1.0"?> |
| 2 <tool id="organism_get_organisms" name="Chado organism get" version="@WRAPPER_VERSION@.0"> | 2 <tool id="organism_get_organisms" name="Chado organism get" version="@WRAPPER_VERSION@.0"> |
| 3 <description></description> | 3 <description></description> |
| 4 <macros> | 4 <macros> |
| 5 <import>macros.xml</import> | 5 <import>macros.xml</import> |
| 6 </macros> | 6 </macros> |
| 7 <expand macro="requirements"/> | 7 <expand macro="requirements"/> |
| 8 <command detect_errors="aggressive"><![CDATA[ | 8 <command detect_errors="aggressive"><![CDATA[ |
| 33 ]]></command> | 33 ]]></command> |
| 34 <inputs> | 34 <inputs> |
| 35 <!-- arguments --> | 35 <!-- arguments --> |
| 36 | 36 |
| 37 <!-- options --> | 37 <!-- options --> |
| 38 <param name="organism_id" label="Organism Id" argument="organism_id" type="integer" help="organism_id filter" optional="True" /> | 38 <param name="organism_id" label="Organism Id" argument="--organism_id" type="integer" help="organism_id filter" optional="True" /> |
| 39 <param name="genus" label="Genus" argument="genus" type="text" help="genus filter" optional="True" /> | 39 <param name="genus" label="Genus" argument="--genus" type="text" help="genus filter" optional="True" /> |
| 40 <param name="species" label="Species" argument="species" type="text" help="species filter" optional="True" /> | 40 <param name="species" label="Species" argument="--species" type="text" help="species filter" optional="True" /> |
| 41 <param name="common" label="Common" argument="common" type="text" help="common filter" optional="True" /> | 41 <param name="common" label="Common" argument="--common" type="text" help="common filter" optional="True" /> |
| 42 <param name="abbr" label="Abbr" argument="abbr" type="text" help="abbr filter" optional="True" /> | 42 <param name="abbr" label="Abbr" argument="--abbr" type="text" help="abbr filter" optional="True" /> |
| 43 <param name="comment" label="Comment" argument="comment" type="text" help="comment filter" optional="True" /> | 43 <param name="comment" label="Comment" argument="--comment" type="text" help="comment filter" optional="True" /> |
| 44 | 44 |
| 45 </inputs> | 45 </inputs> |
| 46 <outputs> | 46 <outputs> |
| 47 <data format="json" name="results"/> | 47 <data format="json" name="results"/> |
| 48 </outputs> | 48 </outputs> |