Mercurial > repos > gga > chado_organism_get_organisms

diff organism_get_organisms.xml @ 7:05e1fd17832b draft

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planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/chado commit f5c5d81fc9781371e12b91c0d609b9201587cda5
author gga
date Fri, 23 Nov 2018 11:14:04 -0500
parents 1ce80eabf7eb
children a3e4a405189e
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line diff
--- a/organism_get_organisms.xml	Mon Nov 05 12:19:01 2018 -0500
+++ b/organism_get_organisms.xml	Fri Nov 23 11:14:04 2018 -0500
@@ -1,6 +1,6 @@
 <?xml version="1.0"?>
 <tool id="organism_get_organisms" name="Chado organism get" version="@WRAPPER_VERSION@.0">
- <description></description>
+    <description></description>
 	<macros>
 		<import>macros.xml</import>
 	</macros>
@@ -35,12 +35,12 @@
     <!-- arguments -->
 
     <!-- options -->
-	<param name="organism_id" label="Organism Id" argument="organism_id" type="integer" help="organism_id filter" optional="True" />
-	<param name="genus" label="Genus" argument="genus" type="text" help="genus filter" optional="True" />
-	<param name="species" label="Species" argument="species" type="text" help="species filter" optional="True" />
-	<param name="common" label="Common" argument="common" type="text" help="common filter" optional="True" />
-	<param name="abbr" label="Abbr" argument="abbr" type="text" help="abbr filter" optional="True" />
-	<param name="comment" label="Comment" argument="comment" type="text" help="comment filter" optional="True" />
+	<param name="organism_id" label="Organism Id" argument="--organism_id" type="integer" help="organism_id filter" optional="True" />
+	<param name="genus" label="Genus" argument="--genus" type="text" help="genus filter" optional="True" />
+	<param name="species" label="Species" argument="--species" type="text" help="species filter" optional="True" />
+	<param name="common" label="Common" argument="--common" type="text" help="common filter" optional="True" />
+	<param name="abbr" label="Abbr" argument="--abbr" type="text" help="abbr filter" optional="True" />
+	<param name="comment" label="Comment" argument="--comment" type="text" help="comment filter" optional="True" />
 
 	</inputs>
 	<outputs>