Mercurial > repos > gga > genenotebook_genenotebook_build

annotate test-data/annot.gff @ 5:bd94e502872a draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit bd0a923142aeba63c9314632659a3095dfbedfa8
author gga
date Tue, 24 Oct 2023 09:09:41 +0000
parents 22f22c3e81bf
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
1 ##gff-version 3
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
2 scaffold_1 funannotate gene 300 1158 . - . ID=MMUCEDO_000001;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
3 scaffold_1 funannotate mRNA 300 1158 . - . ID=MMUCEDO_000001-T1;Parent=MMUCEDO_000001;product=hypothetical protein;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
4 scaffold_1 funannotate exon 880 1158 . - . ID=MMUCEDO_000001-T1.exon1;Parent=MMUCEDO_000001-T1;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
5 scaffold_1 funannotate exon 407 800 . - . ID=MMUCEDO_000001-T1.exon2;Parent=MMUCEDO_000001-T1;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
6 scaffold_1 funannotate exon 300 309 . - . ID=MMUCEDO_000001-T1.exon3;Parent=MMUCEDO_000001-T1;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
7 scaffold_1 funannotate CDS 880 1158 . - 0 ID=MMUCEDO_000001-T1.cds;Parent=MMUCEDO_000001-T1;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
8 scaffold_1 funannotate CDS 407 800 . - 0 ID=MMUCEDO_000001-T1.cds;Parent=MMUCEDO_000001-T1;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
9 scaffold_1 funannotate CDS 300 309 . - 2 ID=MMUCEDO_000001-T1.cds;Parent=MMUCEDO_000001-T1;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
10 scaffold_1 funannotate gene 4621 5580 . + . ID=MMUCEDO_000002;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
11 scaffold_1 funannotate mRNA 4621 5580 . + . ID=MMUCEDO_000002-T1;Parent=MMUCEDO_000002;product=hypothetical protein;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
12 scaffold_1 funannotate exon 4621 4715 . + . ID=MMUCEDO_000002-T1.exon1;Parent=MMUCEDO_000002-T1;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
13 scaffold_1 funannotate exon 4812 5100 . + . ID=MMUCEDO_000002-T1.exon2;Parent=MMUCEDO_000002-T1;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
14 scaffold_1 funannotate exon 5185 5250 . + . ID=MMUCEDO_000002-T1.exon3;Parent=MMUCEDO_000002-T1;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
15 scaffold_1 funannotate exon 5312 5375 . + . ID=MMUCEDO_000002-T1.exon4;Parent=MMUCEDO_000002-T1;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
16 scaffold_1 funannotate exon 5457 5488 . + . ID=MMUCEDO_000002-T1.exon5;Parent=MMUCEDO_000002-T1;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
17 scaffold_1 funannotate exon 5557 5580 . + . ID=MMUCEDO_000002-T1.exon6;Parent=MMUCEDO_000002-T1;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
18 scaffold_1 funannotate CDS 4621 4715 . + 0 ID=MMUCEDO_000002-T1.cds;Parent=MMUCEDO_000002-T1;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
19 scaffold_1 funannotate CDS 4812 5100 . + 1 ID=MMUCEDO_000002-T1.cds;Parent=MMUCEDO_000002-T1;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
20 scaffold_1 funannotate CDS 5185 5250 . + 0 ID=MMUCEDO_000002-T1.cds;Parent=MMUCEDO_000002-T1;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
21 scaffold_1 funannotate CDS 5312 5375 . + 0 ID=MMUCEDO_000002-T1.cds;Parent=MMUCEDO_000002-T1;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
22 scaffold_1 funannotate CDS 5457 5488 . + 2 ID=MMUCEDO_000002-T1.cds;Parent=MMUCEDO_000002-T1;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
23 scaffold_1 funannotate CDS 5557 5580 . + 0 ID=MMUCEDO_000002-T1.cds;Parent=MMUCEDO_000002-T1;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
24 scaffold_1 funannotate gene 6121 6864 . + . ID=MMUCEDO_000003;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
25 scaffold_1 funannotate mRNA 6121 6864 . + . ID=MMUCEDO_000003-T1;Parent=MMUCEDO_000003;product=hypothetical protein;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
26 scaffold_1 funannotate exon 6121 6146 . + . ID=MMUCEDO_000003-T1.exon1;Parent=MMUCEDO_000003-T1;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
27 scaffold_1 funannotate exon 6198 6219 . + . ID=MMUCEDO_000003-T1.exon2;Parent=MMUCEDO_000003-T1;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
28 scaffold_1 funannotate exon 6348 6358 . + . ID=MMUCEDO_000003-T1.exon3;Parent=MMUCEDO_000003-T1;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
29 scaffold_1 funannotate exon 6447 6864 . + . ID=MMUCEDO_000003-T1.exon4;Parent=MMUCEDO_000003-T1;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
30 scaffold_1 funannotate CDS 6121 6146 . + 0 ID=MMUCEDO_000003-T1.cds;Parent=MMUCEDO_000003-T1;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
31 scaffold_1 funannotate CDS 6198 6219 . + 1 ID=MMUCEDO_000003-T1.cds;Parent=MMUCEDO_000003-T1;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
32 scaffold_1 funannotate CDS 6348 6358 . + 0 ID=MMUCEDO_000003-T1.cds;Parent=MMUCEDO_000003-T1;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
33 scaffold_1 funannotate CDS 6447 6864 . + 1 ID=MMUCEDO_000003-T1.cds;Parent=MMUCEDO_000003-T1;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
34 scaffold_1 funannotate gene 6889 7683 . + . ID=MMUCEDO_000004;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
35 scaffold_1 funannotate mRNA 6889 7683 . + . ID=MMUCEDO_000004-T1;Parent=MMUCEDO_000004;product=hypothetical protein;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
36 scaffold_1 funannotate exon 6889 7683 . + . ID=MMUCEDO_000004-T1.exon1;Parent=MMUCEDO_000004-T1;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
37 scaffold_1 funannotate CDS 6889 7683 . + 0 ID=MMUCEDO_000004-T1.cds;Parent=MMUCEDO_000004-T1;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
38 scaffold_1 funannotate gene 9569 10657 . + . ID=MMUCEDO_000005;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
39 scaffold_1 funannotate mRNA 9569 10657 . + . ID=MMUCEDO_000005-T1;Parent=MMUCEDO_000005;product=hypothetical protein;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
40 scaffold_1 funannotate exon 9569 9699 . + . ID=MMUCEDO_000005-T1.exon1;Parent=MMUCEDO_000005-T1;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
41 scaffold_1 funannotate exon 9763 9850 . + . ID=MMUCEDO_000005-T1.exon2;Parent=MMUCEDO_000005-T1;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
42 scaffold_1 funannotate exon 9908 10657 . + . ID=MMUCEDO_000005-T1.exon3;Parent=MMUCEDO_000005-T1;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
43 scaffold_1 funannotate CDS 9569 9699 . + 0 ID=MMUCEDO_000005-T1.cds;Parent=MMUCEDO_000005-T1;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
44 scaffold_1 funannotate CDS 9763 9850 . + 1 ID=MMUCEDO_000005-T1.cds;Parent=MMUCEDO_000005-T1;
22f22c3e81bf planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 12282c16658b37858f49944796fd95515ef0fc0b
gga
parents:
diff changeset
45 scaffold_1 funannotate CDS 9908 10657 . + 0 ID=MMUCEDO_000005-T1.cds;Parent=MMUCEDO_000005-T1;