view test-data/annot.gff @ 11:4398a6fea625 draft default tip

planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/genenotebook commit 6b276b84437470f019a6b13a7bd17171c117cece
author gga
date Mon, 01 Jul 2024 08:44:45 +0000
parents 22f22c3e81bf
children
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##gff-version 3
scaffold_1	funannotate	gene	300	1158	.	-	.	ID=MMUCEDO_000001;
scaffold_1	funannotate	mRNA	300	1158	.	-	.	ID=MMUCEDO_000001-T1;Parent=MMUCEDO_000001;product=hypothetical protein;
scaffold_1	funannotate	exon	880	1158	.	-	.	ID=MMUCEDO_000001-T1.exon1;Parent=MMUCEDO_000001-T1;
scaffold_1	funannotate	exon	407	800	.	-	.	ID=MMUCEDO_000001-T1.exon2;Parent=MMUCEDO_000001-T1;
scaffold_1	funannotate	exon	300	309	.	-	.	ID=MMUCEDO_000001-T1.exon3;Parent=MMUCEDO_000001-T1;
scaffold_1	funannotate	CDS	880	1158	.	-	0	ID=MMUCEDO_000001-T1.cds;Parent=MMUCEDO_000001-T1;
scaffold_1	funannotate	CDS	407	800	.	-	0	ID=MMUCEDO_000001-T1.cds;Parent=MMUCEDO_000001-T1;
scaffold_1	funannotate	CDS	300	309	.	-	2	ID=MMUCEDO_000001-T1.cds;Parent=MMUCEDO_000001-T1;
scaffold_1	funannotate	gene	4621	5580	.	+	.	ID=MMUCEDO_000002;
scaffold_1	funannotate	mRNA	4621	5580	.	+	.	ID=MMUCEDO_000002-T1;Parent=MMUCEDO_000002;product=hypothetical protein;
scaffold_1	funannotate	exon	4621	4715	.	+	.	ID=MMUCEDO_000002-T1.exon1;Parent=MMUCEDO_000002-T1;
scaffold_1	funannotate	exon	4812	5100	.	+	.	ID=MMUCEDO_000002-T1.exon2;Parent=MMUCEDO_000002-T1;
scaffold_1	funannotate	exon	5185	5250	.	+	.	ID=MMUCEDO_000002-T1.exon3;Parent=MMUCEDO_000002-T1;
scaffold_1	funannotate	exon	5312	5375	.	+	.	ID=MMUCEDO_000002-T1.exon4;Parent=MMUCEDO_000002-T1;
scaffold_1	funannotate	exon	5457	5488	.	+	.	ID=MMUCEDO_000002-T1.exon5;Parent=MMUCEDO_000002-T1;
scaffold_1	funannotate	exon	5557	5580	.	+	.	ID=MMUCEDO_000002-T1.exon6;Parent=MMUCEDO_000002-T1;
scaffold_1	funannotate	CDS	4621	4715	.	+	0	ID=MMUCEDO_000002-T1.cds;Parent=MMUCEDO_000002-T1;
scaffold_1	funannotate	CDS	4812	5100	.	+	1	ID=MMUCEDO_000002-T1.cds;Parent=MMUCEDO_000002-T1;
scaffold_1	funannotate	CDS	5185	5250	.	+	0	ID=MMUCEDO_000002-T1.cds;Parent=MMUCEDO_000002-T1;
scaffold_1	funannotate	CDS	5312	5375	.	+	0	ID=MMUCEDO_000002-T1.cds;Parent=MMUCEDO_000002-T1;
scaffold_1	funannotate	CDS	5457	5488	.	+	2	ID=MMUCEDO_000002-T1.cds;Parent=MMUCEDO_000002-T1;
scaffold_1	funannotate	CDS	5557	5580	.	+	0	ID=MMUCEDO_000002-T1.cds;Parent=MMUCEDO_000002-T1;
scaffold_1	funannotate	gene	6121	6864	.	+	.	ID=MMUCEDO_000003;
scaffold_1	funannotate	mRNA	6121	6864	.	+	.	ID=MMUCEDO_000003-T1;Parent=MMUCEDO_000003;product=hypothetical protein;
scaffold_1	funannotate	exon	6121	6146	.	+	.	ID=MMUCEDO_000003-T1.exon1;Parent=MMUCEDO_000003-T1;
scaffold_1	funannotate	exon	6198	6219	.	+	.	ID=MMUCEDO_000003-T1.exon2;Parent=MMUCEDO_000003-T1;
scaffold_1	funannotate	exon	6348	6358	.	+	.	ID=MMUCEDO_000003-T1.exon3;Parent=MMUCEDO_000003-T1;
scaffold_1	funannotate	exon	6447	6864	.	+	.	ID=MMUCEDO_000003-T1.exon4;Parent=MMUCEDO_000003-T1;
scaffold_1	funannotate	CDS	6121	6146	.	+	0	ID=MMUCEDO_000003-T1.cds;Parent=MMUCEDO_000003-T1;
scaffold_1	funannotate	CDS	6198	6219	.	+	1	ID=MMUCEDO_000003-T1.cds;Parent=MMUCEDO_000003-T1;
scaffold_1	funannotate	CDS	6348	6358	.	+	0	ID=MMUCEDO_000003-T1.cds;Parent=MMUCEDO_000003-T1;
scaffold_1	funannotate	CDS	6447	6864	.	+	1	ID=MMUCEDO_000003-T1.cds;Parent=MMUCEDO_000003-T1;
scaffold_1	funannotate	gene	6889	7683	.	+	.	ID=MMUCEDO_000004;
scaffold_1	funannotate	mRNA	6889	7683	.	+	.	ID=MMUCEDO_000004-T1;Parent=MMUCEDO_000004;product=hypothetical protein;
scaffold_1	funannotate	exon	6889	7683	.	+	.	ID=MMUCEDO_000004-T1.exon1;Parent=MMUCEDO_000004-T1;
scaffold_1	funannotate	CDS	6889	7683	.	+	0	ID=MMUCEDO_000004-T1.cds;Parent=MMUCEDO_000004-T1;
scaffold_1	funannotate	gene	9569	10657	.	+	.	ID=MMUCEDO_000005;
scaffold_1	funannotate	mRNA	9569	10657	.	+	.	ID=MMUCEDO_000005-T1;Parent=MMUCEDO_000005;product=hypothetical protein;
scaffold_1	funannotate	exon	9569	9699	.	+	.	ID=MMUCEDO_000005-T1.exon1;Parent=MMUCEDO_000005-T1;
scaffold_1	funannotate	exon	9763	9850	.	+	.	ID=MMUCEDO_000005-T1.exon2;Parent=MMUCEDO_000005-T1;
scaffold_1	funannotate	exon	9908	10657	.	+	.	ID=MMUCEDO_000005-T1.exon3;Parent=MMUCEDO_000005-T1;
scaffold_1	funannotate	CDS	9569	9699	.	+	0	ID=MMUCEDO_000005-T1.cds;Parent=MMUCEDO_000005-T1;
scaffold_1	funannotate	CDS	9763	9850	.	+	1	ID=MMUCEDO_000005-T1.cds;Parent=MMUCEDO_000005-T1;
scaffold_1	funannotate	CDS	9908	10657	.	+	0	ID=MMUCEDO_000005-T1.cds;Parent=MMUCEDO_000005-T1;