annotate expression_delete_biomaterials.xml @ 2:9859ee671832 draft default tip

"planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit ea279e5b47cf3d5767328d17b0e40e57b0238ea1"
author gga
date Wed, 14 Aug 2019 10:06:19 -0400
parents 446eee605ac1
children
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939ae64500f9 planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
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1 <?xml version="1.0"?>
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2 <tool id="expression_delete_biomaterials" name="Delete biomaterials" version="@WRAPPER_VERSION@.0">
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3 <description>from Tripal</description>
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4 <macros>
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5 <import>macros.xml</import>
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6 </macros>
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7 <expand macro="requirements"/>
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8 <code file="tripal.py"/>
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9 <command detect_errors="aggressive"><![CDATA[
939ae64500f9 planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
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10 @AUTH@
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11
939ae64500f9 planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
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12 tripaille expression delete_biomaterials
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13
939ae64500f9 planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
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14 #if $names:
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15 --names '$names'
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16 #end if
939ae64500f9 planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
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17 #if $organism_id:
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18 --organism_id '$organism_id'
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19 #end if
939ae64500f9 planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
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20 #if $analysis_id:
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21 --analysis_id '$analysis_id'
939ae64500f9 planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
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22 #end if
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23
939ae64500f9 planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
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24 &&
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25
1
446eee605ac1 planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 35c5eff77b573a66f3611b4906417df9a440c857
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26 echo "Data loaded" > '$results'
0
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27 ]]></command>
939ae64500f9 planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
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28 <inputs>
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29 <!-- arguments -->
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30
939ae64500f9 planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/tripal commit 690532f4a8e36a334b2d4e15b832532fc1bb8d39
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31 <!-- options -->
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32 <param name="names" label="Names" argument="names" type="text" help="JSON list of biomaterial names to delete." optional="true">
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33 <expand macro="sanitized"/>
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34 </param>
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35
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36 <param argument="--organism_id" type="select" dynamic_options="list_organisms()" label="Organism" optional="true" />
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37 <param argument="--analysis_id" type="select" dynamic_options="list_analyses()" label="Analysis" optional="true" />
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38
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39 </inputs>
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40 <outputs>
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41 <data format="txt" name="results"/>
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42 </outputs>
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43 <help>
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44 Delete some biomaterials
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45
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46 @HELP@
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47 </help>
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48 </tool>