Mercurial > repos > gkumar09 > trinityrnaseq_protocol
changeset 1:0143c8256f93 draft
Deleted selected files
| author | gkumar09 |
|---|---|
| date | Wed, 23 Sep 2015 15:19:28 -0400 |
| parents | e719b2bbe682 |
| children | d84c765d4b06 |
| files | cat.xml |
| diffstat | 1 files changed, 0 insertions(+), 41 deletions(-) [+] |
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--- a/cat.xml Wed Sep 23 15:12:03 2015 -0400 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,41 +0,0 @@ -<tool id="catbash" name="Concatenate datasets"> - <description>tail-to-head</description> - <command interpreter="python"> - bash_command_executer.py cat - $input1 - #for $q in $queries - ${q.input2} - #end for - > $out_file1 - </command> - <inputs> - <param name="input1" type="data" label="Concatenate Dataset"/> - <repeat name="queries" title="Dataset"> - <param name="input2" type="data" label="Select" /> - </repeat> - </inputs> - <outputs> - <data name="out_file1" format="input" metadata_source="input1"/> - </outputs> - <tests> - <test> - <param name="input1" value="1.bed"/> - <param name="input2" value="2.bed"/> - <output name="out_file1" file="cat_wrapper_out1.bed"/> - </test> - <!--TODO: if possible, enhance the underlying test code to handle this test - the problem is multiple params with the same name "input2" - <test> - <param name="input1" value="1.bed"/> - <param name="input2" value="2.bed"/> - <param name="input2" value="3.bed"/> - <output name="out_file1" file="cat_wrapper_out2.bed"/> - </test> - --> - </tests> - <help> - - no help - - </help> -</tool>