Mercurial > repos > goeckslab > pycaret_predict

annotate utils.py @ 17:c5c324ac29fc draft default tip

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planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c
author goeckslab
date Sat, 06 Dec 2025 14:20:36 +0000
parents a2aeeb754d76
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
goeckslab
parents:
diff changeset
1 import base64
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
goeckslab
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2 import logging
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1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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3 from typing import Optional
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1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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4
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0314dad38aaa planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit ff6d674ecc83db933153b797ef4dbde17f07b10e
goeckslab
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5 import numpy as np
0314dad38aaa planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit ff6d674ecc83db933153b797ef4dbde17f07b10e
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1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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7 logging.basicConfig(level=logging.DEBUG)
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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8 LOG = logging.getLogger(__name__)
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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9
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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11 def get_html_template() -> str:
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1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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12 return """
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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13 <html>
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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14 <head>
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a32ff7201629 planemo upload for repository https://github.com/goeckslab/gleam commit 06c0da44ac93256dfb616a6b40276b5485a71e8e
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15 <meta charset="UTF-8">
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1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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16 <title>Model Training Report</title>
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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17 <style>
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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18 body {
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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19 font-family: Arial, sans-serif;
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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20 margin: 0;
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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21 padding: 20px;
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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22 background-color: #f4f4f4;
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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23 }
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1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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24 /* allow horizontal scrolling if content overflows */
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1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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25 .container {
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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26 max-width: 800px;
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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27 margin: auto;
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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28 background: white;
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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29 padding: 20px;
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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30 box-shadow: 0 0 10px rgba(0, 0, 0, 0.1);
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31 overflow-x: auto;
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1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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32 }
8
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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33
0
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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34 h1 {
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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35 text-align: center;
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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36 color: #333;
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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37 }
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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38 h2 {
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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39 border-bottom: 2px solid #4CAF50;
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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40 color: #4CAF50;
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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41 padding-bottom: 5px;
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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42 }
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1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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43
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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44 /* wrapper for tables to allow individual horizontal scroll */
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
goeckslab
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45 .table-wrapper {
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
goeckslab
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46 overflow-x: auto;
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
goeckslab
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47 margin: 1rem 0;
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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48 }
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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49
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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50 /* revert table styling to full borders */
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1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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51 table {
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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52 width: 100%;
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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53 border-collapse: collapse;
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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54 margin: 20px 0;
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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55 }
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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56 table, th, td {
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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57 border: 1px solid #ddd;
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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58 }
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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59 th, td {
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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60 padding: 8px;
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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61 text-align: left;
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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62 }
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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63 th {
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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64 background-color: #4CAF50;
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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65 color: white;
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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66 }
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67
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68 /* Center specific numeric columns */
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69 .table-dataset-overview td:nth-child(n+2),
c5c324ac29fc planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c
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70 .table-dataset-overview th:nth-child(n+2) {
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71 text-align: center;
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72 }
c5c324ac29fc planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c
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73 .table-perf-summary td:nth-child(n+2),
c5c324ac29fc planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c
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74 .table-perf-summary th:nth-child(n+2) {
c5c324ac29fc planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c
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75 text-align: center;
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76 }
c5c324ac29fc planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c
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77 .table-setup-params td:nth-child(2),
c5c324ac29fc planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c
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78 .table-setup-params th:nth-child(2) {
c5c324ac29fc planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c
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79 text-align: center;
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80 }
c5c324ac29fc planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c
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81 .table-hyperparams td:nth-child(2),
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82 .table-hyperparams th:nth-child(2) {
c5c324ac29fc planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c
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83 text-align: center;
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84 }
c5c324ac29fc planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c
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85 .table-fi-scope td:nth-child(2),
c5c324ac29fc planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c
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86 .table-fi-scope th:nth-child(2) {
c5c324ac29fc planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c
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87 text-align: center;
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88 }
c5c324ac29fc planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c
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89
0
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90 .plot {
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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91 text-align: center;
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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92 margin: 20px 0;
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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93 }
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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94 .plot img {
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95 max-width: 100%;
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96 height: auto;
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97 }
8
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98
0
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99 .tabs {
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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100 display: flex;
8
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101 align-items: center;
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
102 border-bottom: 2px solid #ccc;
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
103 margin-bottom: 1rem;
0
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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104 }
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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105 .tab {
8
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diff changeset
106 padding: 10px 20px;
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
107 cursor: pointer;
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
108 border: 1px solid #ccc;
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
109 border-bottom: none;
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
110 background: #f9f9f9;
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
111 margin-right: 5px;
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
112 border-top-left-radius: 8px;
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
113 border-top-right-radius: 8px;
0
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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114 }
8
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diff changeset
115 .tab.active {
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
116 background: white;
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
117 font-weight: bold;
0
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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118 }
8
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diff changeset
119
0
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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diff changeset
120 .tab-content {
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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121 display: none;
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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122 padding: 20px;
8
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diff changeset
123 border: 1px solid #ccc;
0
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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diff changeset
124 border-top: none;
8
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diff changeset
125 background: white;
0
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126 }
8
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diff changeset
127 .tab-content.active {
0
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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128 display: block;
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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129 }
8
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diff changeset
130
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diff changeset
131 .help-btn {
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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132 margin-left: auto;
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diff changeset
133 padding: 6px 12px;
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
134 font-size: 0.9rem;
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
135 border: 1px solid #4CAF50;
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
136 border-radius: 4px;
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
137 background: #4CAF50;
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
138 color: white;
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
139 cursor: pointer;
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
140 }
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
141
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diff changeset
142 /* sortable table header arrows */
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diff changeset
143 table.sortable th {
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
144 position: relative;
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
145 padding-right: 20px; /* room for the arrow */
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
146 cursor: pointer;
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
147 }
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
148 table.sortable th::after {
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
149 content: '↕';
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
150 position: absolute;
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
151 right: 8px;
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
152 opacity: 0.4;
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
153 transition: opacity 0.2s;
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diff changeset
154 }
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
155 table.sortable th:hover::after {
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
156 opacity: 0.7;
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
157 }
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
158 table.sortable th.sorted-asc::after {
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
159 content: '↑';
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
160 opacity: 1;
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
161 }
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
162 table.sortable th.sorted-desc::after {
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
163 content: '↓';
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
164 opacity: 1;
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
165 }
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
166 </style>
0
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diff changeset
167 </head>
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diff changeset
168 <body>
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diff changeset
169 <div class="container">
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170 """
1f20fe57fdee planemo upload for repository https://github.com/goeckslab/Galaxy-Pycaret commit d79b0f722b7d09505a526d1a4332f87e548a3df1
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171
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172
8
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diff changeset
173 def get_html_closing() -> str:
0
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diff changeset
174 return """
8
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diff changeset
175 </div>
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diff changeset
176 <script>
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
177 document.addEventListener('DOMContentLoaded', () => {
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
178 document.querySelectorAll('table.sortable').forEach(table => {
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
179 const getCellValue = (row, idx) =>
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
180 row.children[idx].innerText.trim() || '';
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diff changeset
181
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diff changeset
182 const comparer = (idx, asc) => (a, b) => {
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
183 const v1 = getCellValue(asc ? a : b, idx);
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
184 const v2 = getCellValue(asc ? b : a, idx);
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
185 const n1 = parseFloat(v1), n2 = parseFloat(v2);
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
186 if (!isNaN(n1) && !isNaN(n2)) return n1 - n2;
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
187 return v1.localeCompare(v2);
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
188 };
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
189
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diff changeset
190 table.querySelectorAll('th').forEach((th, idx) => {
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
191 let asc = true;
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
192 th.addEventListener('click', () => {
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
193 // sort rows
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diff changeset
194 const tbody = table.tBodies[0];
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
195 Array.from(tbody.rows)
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
196 .sort(comparer(idx, asc))
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
197 .forEach(row => tbody.appendChild(row));
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
198 // update arrow classes
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diff changeset
199 table.querySelectorAll('th').forEach(h => {
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
200 h.classList.remove('sorted-asc','sorted-desc');
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
201 });
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
202 th.classList.add(asc ? 'sorted-asc' : 'sorted-desc');
1aed7d47c5ec planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54
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diff changeset
203 asc = !asc;
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204 });
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205 });
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206 });
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207 });
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208 </script>
0
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209 </body>
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210 </html>
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211 """
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212
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213
8
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214 def build_tabbed_html(
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215 summary_html: str,
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216 test_html: str,
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217 feature_html: str,
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218 explainer_html: Optional[str] = None,
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219 config_html: Optional[str] = None,
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220 ) -> str:
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221 """
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222 Render the tabbed sections and an always-visible Help button.
0
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223 """
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224 # CSS
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225 css = get_html_template().split("<body>")[1].rsplit("</style>", 1)[0] + "</style>"
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226
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227 # Tabs header
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228 tabs = ['<div class="tabs">']
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229 default_active = "summary"
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230 if config_html:
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231 default_active = "config"
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232 tabs.append(
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233 '<div class="tab active" onclick="showTab(\'config\')">Model Config Summary</div>'
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234 )
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235 tabs.append(
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236 '<div class="tab" onclick="showTab(\'summary\')">Validation Summary</div>'
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237 )
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238 else:
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239 tabs.append(
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240 '<div class="tab active" onclick="showTab(\'summary\')">Validation Summary</div>'
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241 )
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242 tabs.extend([
8
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243 '<div class="tab" onclick="showTab(\'test\')">Test Summary</div>',
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244 '<div class="tab" onclick="showTab(\'feature\')">Feature Importance</div>',
17
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245 ])
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246 if explainer_html:
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247 tabs.append(
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248 '<div class="tab" onclick="showTab(\'explainer\')">Explainer Plots</div>'
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249 )
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250 tabs.append('<button id="openMetricsHelp" class="help-btn">Help</button>')
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251 tabs.append("</div>")
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252 tabs_section = "\n".join(tabs)
0
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253
8
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254 # Content
17
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255 contents = []
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256 if config_html:
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257 contents.append(
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258 f'<div id="config" class="tab-content {"active" if default_active == "config" else ""}">{config_html}</div>'
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259 )
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260 contents.append(
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261 f'<div id="summary" class="tab-content {"active" if default_active == "summary" else ""}">{summary_html}</div>'
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262 )
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263 contents.append(f'<div id="test" class="tab-content">{test_html}</div>')
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264 contents.append(f'<div id="feature" class="tab-content">{feature_html}</div>')
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265 if explainer_html:
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266 contents.append(
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267 f'<div id="explainer" class="tab-content">{explainer_html}</div>'
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268 )
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269 content_section = "\n".join(contents)
0
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270
8
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271 # JS
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272 js = """
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273 <script>
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274 function showTab(id) {
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275 document.querySelectorAll('.tab-content').forEach(el=>el.classList.remove('active'));
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276 document.querySelectorAll('.tab').forEach(el=>el.classList.remove('active'));
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277 document.getElementById(id).classList.add('active');
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278 document.querySelector(`.tab[onclick*="${id}"]`).classList.add('active');
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279 }
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280 </script>
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281 """
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282
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283 return css + "\n" + tabs_section + "\n" + content_section + "\n" + js
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284
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285
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286 def customize_figure_layout(fig, margin_dict=None):
0
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287 if margin_dict is None:
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288 margin_dict = {"l": 40, "r": 40, "t": 40, "b": 40}
15
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289 fig.update_layout(
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290 margin=margin_dict,
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291 plot_bgcolor="#ffffff",
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292 paper_bgcolor="#ffffff",
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293 )
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294 fig.update_xaxes(gridcolor="#e8e8e8")
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295 fig.update_yaxes(gridcolor="#e8e8e8")
0
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296 return fig
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297
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298
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299 def add_plot_to_html(fig, include_plotlyjs=True) -> str:
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300 custom_margin = {"l": 40, "r": 40, "t": 60, "b": 60}
0
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301 fig = customize_figure_layout(fig, margin_dict=custom_margin)
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302 return fig.to_html(
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303 full_html=False,
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304 default_height=350,
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305 include_plotlyjs="cdn" if include_plotlyjs else False,
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306 )
0
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307
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308
8
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309 def add_hr_to_html() -> str:
0
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310 return "<hr>"
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312
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313 def encode_image_to_base64(image_path: str) -> str:
0
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314 with open(image_path, "rb") as img_file:
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315 return base64.b64encode(img_file.read()).decode("utf-8")
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316
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317
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318 def predict_proba(self, X):
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319 pred = self.predict(X)
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320 return np.vstack((1 - pred, pred)).T