annotate test-data/phenotype_workflow.csv @ 0:834ee9481948 draft

planemo upload for repository https://github.com/goeckslab/tools-mti/tree/main/tools/scimap commit 9fb5578191db8a559191e45156cfb95350f01aea
author goeckslab
date Mon, 10 Jun 2024 18:45:07 +0000
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
834ee9481948 planemo upload for repository https://github.com/goeckslab/tools-mti/tree/main/tools/scimap commit 9fb5578191db8a559191e45156cfb95350f01aea
goeckslab
parents:
diff changeset
1 ,,ASMA,CD163,CD206,CD68,CD20,CD21,CD3D,CD45,CD56,CD8A,FOXP3,CD11B,CD11C,CD15,CD4,PD1,HLADR,CD25
834ee9481948 planemo upload for repository https://github.com/goeckslab/tools-mti/tree/main/tools/scimap commit 9fb5578191db8a559191e45156cfb95350f01aea
goeckslab
parents:
diff changeset
2 all,Other Immune cells,,,,,,,,pos,,,,,,,,,,
834ee9481948 planemo upload for repository https://github.com/goeckslab/tools-mti/tree/main/tools/scimap commit 9fb5578191db8a559191e45156cfb95350f01aea
goeckslab
parents:
diff changeset
3 all,ASMA+ cells,pos,,,,,,,,,,,,,,,,,
834ee9481948 planemo upload for repository https://github.com/goeckslab/tools-mti/tree/main/tools/scimap commit 9fb5578191db8a559191e45156cfb95350f01aea
goeckslab
parents:
diff changeset
4 Other Immune cells,T cells,,,,,,,pos,,,,,,,,,,,
834ee9481948 planemo upload for repository https://github.com/goeckslab/tools-mti/tree/main/tools/scimap commit 9fb5578191db8a559191e45156cfb95350f01aea
goeckslab
parents:
diff changeset
5 Other Immune cells,B cells,,,,,pos,,,,,,,,,,,,,
834ee9481948 planemo upload for repository https://github.com/goeckslab/tools-mti/tree/main/tools/scimap commit 9fb5578191db8a559191e45156cfb95350f01aea
goeckslab
parents:
diff changeset
6 Other Immune cells,Myeloid Lineage,,anypos,anypos,anypos,,,,,,,,anypos,anypos,,,,,
834ee9481948 planemo upload for repository https://github.com/goeckslab/tools-mti/tree/main/tools/scimap commit 9fb5578191db8a559191e45156cfb95350f01aea
goeckslab
parents:
diff changeset
7 Other Immune cells,NK cells,,,,,,,,,pos,,,,,,,,,
834ee9481948 planemo upload for repository https://github.com/goeckslab/tools-mti/tree/main/tools/scimap commit 9fb5578191db8a559191e45156cfb95350f01aea
goeckslab
parents:
diff changeset
8 Other Immune cells,Granulocytes,,,,,,,,,,,,,,pos,,,,
834ee9481948 planemo upload for repository https://github.com/goeckslab/tools-mti/tree/main/tools/scimap commit 9fb5578191db8a559191e45156cfb95350f01aea
goeckslab
parents:
diff changeset
9 Myeloid Lineage,T cells,,,,,,,pos,,,,,,,,,,,
834ee9481948 planemo upload for repository https://github.com/goeckslab/tools-mti/tree/main/tools/scimap commit 9fb5578191db8a559191e45156cfb95350f01aea
goeckslab
parents:
diff changeset
10 Myeloid Lineage,B cells,,,,,pos,,,,,,,,,,,,,
834ee9481948 planemo upload for repository https://github.com/goeckslab/tools-mti/tree/main/tools/scimap commit 9fb5578191db8a559191e45156cfb95350f01aea
goeckslab
parents:
diff changeset
11 Myeloid Lineage,NK cells,,,,,,,,,pos,,,,,,,,,
834ee9481948 planemo upload for repository https://github.com/goeckslab/tools-mti/tree/main/tools/scimap commit 9fb5578191db8a559191e45156cfb95350f01aea
goeckslab
parents:
diff changeset
12 Myeloid Lineage,Granulocytes,,,,,,,,,,,,,,pos,,,,
834ee9481948 planemo upload for repository https://github.com/goeckslab/tools-mti/tree/main/tools/scimap commit 9fb5578191db8a559191e45156cfb95350f01aea
goeckslab
parents:
diff changeset
13 T cells,CD4 T cells,,,,,,,,,,,,,,,pos,,,
834ee9481948 planemo upload for repository https://github.com/goeckslab/tools-mti/tree/main/tools/scimap commit 9fb5578191db8a559191e45156cfb95350f01aea
goeckslab
parents:
diff changeset
14 T cells,CD8 T cells,,,,,,,,,,pos,,,,,,,,
834ee9481948 planemo upload for repository https://github.com/goeckslab/tools-mti/tree/main/tools/scimap commit 9fb5578191db8a559191e45156cfb95350f01aea
goeckslab
parents:
diff changeset
15 CD4 T cells,Regulatory T cells,,,,,,,,,,,pos,,,,,,,
834ee9481948 planemo upload for repository https://github.com/goeckslab/tools-mti/tree/main/tools/scimap commit 9fb5578191db8a559191e45156cfb95350f01aea
goeckslab
parents:
diff changeset
16 CD4 T cells,Follicular Helper T cells,,,,,,,,,,,,,,,,pos,,
834ee9481948 planemo upload for repository https://github.com/goeckslab/tools-mti/tree/main/tools/scimap commit 9fb5578191db8a559191e45156cfb95350f01aea
goeckslab
parents:
diff changeset
17 CD8 T cells,PD1+ T cells,,,,,,,,,,,,,,,,pos,,
834ee9481948 planemo upload for repository https://github.com/goeckslab/tools-mti/tree/main/tools/scimap commit 9fb5578191db8a559191e45156cfb95350f01aea
goeckslab
parents:
diff changeset
18 Myeloid Lineage,CD68+ Macrophages,,,,pos,,,,,,,,,,,,,,
834ee9481948 planemo upload for repository https://github.com/goeckslab/tools-mti/tree/main/tools/scimap commit 9fb5578191db8a559191e45156cfb95350f01aea
goeckslab
parents:
diff changeset
19 Myeloid Lineage,M2 Macrophages,,anypos,anypos,,,,,,,,,,,,,,,
834ee9481948 planemo upload for repository https://github.com/goeckslab/tools-mti/tree/main/tools/scimap commit 9fb5578191db8a559191e45156cfb95350f01aea
goeckslab
parents:
diff changeset
20 Myeloid Lineage,Myeloid Dendritic cells,,,,,,,,,,,,,,,,,pos,
834ee9481948 planemo upload for repository https://github.com/goeckslab/tools-mti/tree/main/tools/scimap commit 9fb5578191db8a559191e45156cfb95350f01aea
goeckslab
parents:
diff changeset
21 Myeloid Lineage,Follicular Dendritic cells,,,,,,pos,,,,,,,,,,,,
834ee9481948 planemo upload for repository https://github.com/goeckslab/tools-mti/tree/main/tools/scimap commit 9fb5578191db8a559191e45156cfb95350f01aea
goeckslab
parents:
diff changeset
22 CD68+ Macrophages,M1 Macrophages,,,,,,,,,,,,,,,,,pos,
834ee9481948 planemo upload for repository https://github.com/goeckslab/tools-mti/tree/main/tools/scimap commit 9fb5578191db8a559191e45156cfb95350f01aea
goeckslab
parents:
diff changeset
23 Myeloid Dendritic cells,CD25+ Dendritic cells,,,,,,,,,,,,,,,,,,pos