tabular_learner: utils.py annotate

annotate utils.py @ 13:bf0df21a1ea3 draft default tip

planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c

author	goeckslab
date	Sat, 06 Dec 2025 14:20:23 +0000
parents	a76dfceb62e0
children

rev	line source
0 209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	1 import base64
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	2 import logging
4 11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	3 from typing import Optional
0 209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	4
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	5 import numpy as np
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	6
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	7 logging.basicConfig(level=logging.DEBUG)
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	8 LOG = logging.getLogger(__name__)
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	9
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	10
4 11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	11 def get_html_template() -> str:
0 209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	12 return """
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	13 <html>
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	14 <head>
2 77c88226bfde planemo upload for repository https://github.com/goeckslab/gleam commit 06c0da44ac93256dfb616a6b40276b5485a71e8e goeckslab parents: 0 diff changeset	15 <meta charset="UTF-8">
0 209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	16 <title>Model Training Report</title>
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	17 <style>
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	18 body {
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	19 font-family: Arial, sans-serif;
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	20 margin: 0;
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	21 padding: 20px;
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	22 background-color: #f4f4f4;
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	23 }
4 11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	24 /* allow horizontal scrolling if content overflows */
0 209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	25 .container {
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	26 max-width: 800px;
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	27 margin: auto;
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	28 background: white;
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	29 padding: 20px;
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	30 box-shadow: 0 0 10px rgba(0, 0, 0, 0.1);
4 11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	31 overflow-x: auto;
0 209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	32 }
4 11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	33
0 209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	34 h1 {
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	35 text-align: center;
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	36 color: #333;
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	37 }
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	38 h2 {
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	39 border-bottom: 2px solid #4CAF50;
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	40 color: #4CAF50;
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	41 padding-bottom: 5px;
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	42 }
4 11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	43
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	44 /* wrapper for tables to allow individual horizontal scroll */
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	45 .table-wrapper {
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	46 overflow-x: auto;
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	47 margin: 1rem 0;
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	48 }
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	49
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	50 /* revert table styling to full borders */
0 209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	51 table {
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	52 width: 100%;
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	53 border-collapse: collapse;
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	54 margin: 20px 0;
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	55 }
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	56 table, th, td {
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	57 border: 1px solid #ddd;
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	58 }
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	59 th, td {
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	60 padding: 8px;
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	61 text-align: left;
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	62 }
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	63 th {
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	64 background-color: #4CAF50;
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	65 color: white;
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	66 }
4 11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	67
13 bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	68 /* Center specific numeric columns */
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	69 .table-dataset-overview td:nth-child(n+2),
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	70 .table-dataset-overview th:nth-child(n+2) {
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	71 text-align: center;
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	72 }
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	73 .table-perf-summary td:nth-child(n+2),
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	74 .table-perf-summary th:nth-child(n+2) {
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	75 text-align: center;
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	76 }
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	77 .table-setup-params td:nth-child(2),
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	78 .table-setup-params th:nth-child(2) {
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	79 text-align: center;
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	80 }
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	81 .table-hyperparams td:nth-child(2),
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	82 .table-hyperparams th:nth-child(2) {
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	83 text-align: center;
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	84 }
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	85 .table-fi-scope td:nth-child(2),
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	86 .table-fi-scope th:nth-child(2) {
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	87 text-align: center;
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	88 }
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	89
0 209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	90 .plot {
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	91 text-align: center;
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	92 margin: 20px 0;
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	93 }
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	94 .plot img {
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	95 max-width: 100%;
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	96 height: auto;
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	97 }
4 11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	98
0 209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	99 .tabs {
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	100 display: flex;
4 11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	101 align-items: center;
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	102 border-bottom: 2px solid #ccc;
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	103 margin-bottom: 1rem;
0 209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	104 }
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	105 .tab {
4 11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	106 padding: 10px 20px;
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	107 cursor: pointer;
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	108 border: 1px solid #ccc;
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	109 border-bottom: none;
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	110 background: #f9f9f9;
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	111 margin-right: 5px;
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	112 border-top-left-radius: 8px;
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	113 border-top-right-radius: 8px;
0 209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	114 }
4 11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	115 .tab.active {
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	116 background: white;
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	117 font-weight: bold;
0 209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	118 }
4 11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	119
0 209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	120 .tab-content {
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	121 display: none;
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	122 padding: 20px;
4 11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	123 border: 1px solid #ccc;
0 209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	124 border-top: none;
4 11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	125 background: white;
0 209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	126 }
4 11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	127 .tab-content.active {
0 209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	128 display: block;
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	129 }
4 11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	130
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	131 .help-btn {
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	132 margin-left: auto;
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	133 padding: 6px 12px;
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	134 font-size: 0.9rem;
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	135 border: 1px solid #4CAF50;
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	136 border-radius: 4px;
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	137 background: #4CAF50;
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	138 color: white;
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	139 cursor: pointer;
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	140 }
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	141
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	142 /* sortable table header arrows */
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	143 table.sortable th {
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	144 position: relative;
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	145 padding-right: 20px; /* room for the arrow */
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	146 cursor: pointer;
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	147 }
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	148 table.sortable th::after {
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	149 content: '↕';
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	150 position: absolute;
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	151 right: 8px;
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	152 opacity: 0.4;
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	153 transition: opacity 0.2s;
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	154 }
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	155 table.sortable th:hover::after {
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	156 opacity: 0.7;
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	157 }
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	158 table.sortable th.sorted-asc::after {
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	159 content: '↑';
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	160 opacity: 1;
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	161 }
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	162 table.sortable th.sorted-desc::after {
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	163 content: '↓';
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	164 opacity: 1;
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	165 }
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	166 </style>
0 209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	167 </head>
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	168 <body>
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	169 <div class="container">
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	170 """
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	171
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	172
4 11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	173 def get_html_closing() -> str:
0 209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	174 return """
4 11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	175 </div>
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	176 <script>
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	177 document.addEventListener('DOMContentLoaded', () => {
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	178 document.querySelectorAll('table.sortable').forEach(table => {
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	179 const getCellValue = (row, idx) =>
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	180 row.children[idx].innerText.trim() \|\| '';
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	181
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	182 const comparer = (idx, asc) => (a, b) => {
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	183 const v1 = getCellValue(asc ? a : b, idx);
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	184 const v2 = getCellValue(asc ? b : a, idx);
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	185 const n1 = parseFloat(v1), n2 = parseFloat(v2);
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	186 if (!isNaN(n1) && !isNaN(n2)) return n1 - n2;
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	187 return v1.localeCompare(v2);
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	188 };
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	189
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	190 table.querySelectorAll('th').forEach((th, idx) => {
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	191 let asc = true;
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	192 th.addEventListener('click', () => {
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	193 // sort rows
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	194 const tbody = table.tBodies[0];
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	195 Array.from(tbody.rows)
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	196 .sort(comparer(idx, asc))
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	197 .forEach(row => tbody.appendChild(row));
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	198 // update arrow classes
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	199 table.querySelectorAll('th').forEach(h => {
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	200 h.classList.remove('sorted-asc','sorted-desc');
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	201 });
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	202 th.classList.add(asc ? 'sorted-asc' : 'sorted-desc');
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	203 asc = !asc;
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	204 });
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	205 });
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	206 });
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	207 });
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	208 </script>
0 209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	209 </body>
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	210 </html>
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	211 """
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	212
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	213
4 11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	214 def build_tabbed_html(
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	215 summary_html: str,
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	216 test_html: str,
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	217 feature_html: str,
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	218 explainer_html: Optional[str] = None,
13 bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	219 config_html: Optional[str] = None,
4 11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	220 ) -> str:
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	221 """
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	222 Render the tabbed sections and an always-visible Help button.
0 209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	223 """
4 11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	224 # CSS
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	225 css = get_html_template().split("<body>")[1].rsplit("</style>", 1)[0] + "</style>"
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	226
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	227 # Tabs header
13 bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	228 tabs = ['<div class="tabs">']
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	229 default_active = "summary"
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	230 if config_html:
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	231 default_active = "config"
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	232 tabs.append(
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	233 '<div class="tab active" onclick="showTab(\'config\')">Model Config Summary</div>'
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	234 )
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	235 tabs.append(
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	236 '<div class="tab" onclick="showTab(\'summary\')">Validation Summary</div>'
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	237 )
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	238 else:
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	239 tabs.append(
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	240 '<div class="tab active" onclick="showTab(\'summary\')">Validation Summary</div>'
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	241 )
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	242 tabs.extend([
4 11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	243 '<div class="tab" onclick="showTab(\'test\')">Test Summary</div>',
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	244 '<div class="tab" onclick="showTab(\'feature\')">Feature Importance</div>',
13 bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	245 ])
4 11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	246 if explainer_html:
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	247 tabs.append(
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	248 '<div class="tab" onclick="showTab(\'explainer\')">Explainer Plots</div>'
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	249 )
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	250 tabs.append('<button id="openMetricsHelp" class="help-btn">Help</button>')
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	251 tabs.append("</div>")
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	252 tabs_section = "\n".join(tabs)
0 209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	253
4 11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	254 # Content
13 bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	255 contents = []
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	256 if config_html:
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	257 contents.append(
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	258 f'<div id="config" class="tab-content {"active" if default_active == "config" else ""}">{config_html}</div>'
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	259 )
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	260 contents.append(
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	261 f'<div id="summary" class="tab-content {"active" if default_active == "summary" else ""}">{summary_html}</div>'
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	262 )
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	263 contents.append(f'<div id="test" class="tab-content">{test_html}</div>')
bf0df21a1ea3 planemo upload for repository https://github.com/goeckslab/gleam commit 7fc20c9ddc2b641975138c9d67b5da240af0484c goeckslab parents: 11 diff changeset	264 contents.append(f'<div id="feature" class="tab-content">{feature_html}</div>')
4 11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	265 if explainer_html:
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	266 contents.append(
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	267 f'<div id="explainer" class="tab-content">{explainer_html}</div>'
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	268 )
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	269 content_section = "\n".join(contents)
0 209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	270
4 11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	271 # JS
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	272 js = """
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	273 <script>
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	274 function showTab(id) {
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	275 document.querySelectorAll('.tab-content').forEach(el=>el.classList.remove('active'));
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	276 document.querySelectorAll('.tab').forEach(el=>el.classList.remove('active'));
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	277 document.getElementById(id).classList.add('active');
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	278 document.querySelector(`.tab[onclick*="${id}"]`).classList.add('active');
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	279 }
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	280 </script>
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	281 """
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	282
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	283 return css + "\n" + tabs_section + "\n" + content_section + "\n" + js
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	284
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	285
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	286 def customize_figure_layout(fig, margin_dict=None):
0 209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	287 if margin_dict is None:
4 11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	288 margin_dict = {"l": 40, "r": 40, "t": 40, "b": 40}
11 a76dfceb62e0 planemo upload for repository https://github.com/goeckslab/gleam commit bc50fef8acb44aca15d0a1746e6c0c967da5bb17 goeckslab parents: 6 diff changeset	289 fig.update_layout(
a76dfceb62e0 planemo upload for repository https://github.com/goeckslab/gleam commit bc50fef8acb44aca15d0a1746e6c0c967da5bb17 goeckslab parents: 6 diff changeset	290 margin=margin_dict,
a76dfceb62e0 planemo upload for repository https://github.com/goeckslab/gleam commit bc50fef8acb44aca15d0a1746e6c0c967da5bb17 goeckslab parents: 6 diff changeset	291 plot_bgcolor="#ffffff",
a76dfceb62e0 planemo upload for repository https://github.com/goeckslab/gleam commit bc50fef8acb44aca15d0a1746e6c0c967da5bb17 goeckslab parents: 6 diff changeset	292 paper_bgcolor="#ffffff",
a76dfceb62e0 planemo upload for repository https://github.com/goeckslab/gleam commit bc50fef8acb44aca15d0a1746e6c0c967da5bb17 goeckslab parents: 6 diff changeset	293 )
a76dfceb62e0 planemo upload for repository https://github.com/goeckslab/gleam commit bc50fef8acb44aca15d0a1746e6c0c967da5bb17 goeckslab parents: 6 diff changeset	294 fig.update_xaxes(gridcolor="#e8e8e8")
a76dfceb62e0 planemo upload for repository https://github.com/goeckslab/gleam commit bc50fef8acb44aca15d0a1746e6c0c967da5bb17 goeckslab parents: 6 diff changeset	295 fig.update_yaxes(gridcolor="#e8e8e8")
0 209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	296 return fig
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	297
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	298
4 11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	299 def add_plot_to_html(fig, include_plotlyjs=True) -> str:
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	300 custom_margin = {"l": 40, "r": 40, "t": 60, "b": 60}
0 209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	301 fig = customize_figure_layout(fig, margin_dict=custom_margin)
4 11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	302 return fig.to_html(
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	303 full_html=False,
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	304 default_height=350,
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	305 include_plotlyjs="cdn" if include_plotlyjs else False,
11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	306 )
0 209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	307
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	308
4 11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	309 def add_hr_to_html() -> str:
0 209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	310 return "<hr>"
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	311
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	312
4 11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	313 def encode_image_to_base64(image_path: str) -> str:
0 209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	314 with open(image_path, "rb") as img_file:
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	315 return base64.b64encode(img_file.read()).decode("utf-8")
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	316
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	317
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	318 def predict_proba(self, X):
209b663a4f62 planemo upload for repository https://github.com/goeckslab/gleam commit 5dd048419fcbd285a327f88267e93996cd279ee6 goeckslab parents: diff changeset	319 pred = self.predict(X)
4 11fdac5affb3 planemo upload for repository https://github.com/goeckslab/gleam commit 8112548ac44b7a4769093d76c722c8fcdeaaef54 goeckslab parents: 2 diff changeset	320 return np.vstack((1 - pred, pred)).T

Mercurial > repos > goeckslab > tabular_learner

annotate utils.py @ 13:bf0df21a1ea3 draft default tip